STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdr9c7Short-chain dehydrogenase/reductase family 9C member 7. (313 aa)    
Predicted Functional Partners:
Dhrs2
Dehydrogenase/reductase SDR family member 2, mitochondrial-like.
  
 
 0.608
Rdh14
Retinol dehydrogenase 14.
   
 
 0.574
Lrat
Phosphatidylcholine-retinol O-acyltransferase.
      
 0.572
Pnpla1
Patatin-like phospholipase domain containing 1.
      
 0.549
Rpe65
Retinoid isomerohydrolase / lutein isomerase.
   
  
 0.549
Hsd11b1
Corticosteroid 11-beta-dehydrogenase isozyme 1.
  
 
 0.546
Rlbp1
Retinaldehyde-binding protein 1.
    
 0.531
Cyp26a1
Cytochrome P450 family 26 subfamily A.
   
 
 0.509
Aldh1a2
Retinal dehydrogenase 2 isoform X1.
   
  
 0.505
Nipal4
Magnesium transporter NIPA4.
      
 0.503
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.