STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nemp1Nuclear envelope integral membrane protein 1 isoform X1. (436 aa)    
Predicted Functional Partners:
Ranbp2
E3 SUMO-protein ligase RanBP2.
   
 
 0.590
Rangap1
Ran GTPase-activating protein 1.
   
 
 0.580
Zfp956
KRAB domain-containing zinc finger protein.
      
 0.556
Ube2i
Ubiquitin-conjugating enzyme E2 I.
    
 
 0.521
Ubald1
UBA-like domain-containing protein 1 isoform X1.
      
 0.520
Pank2
Pantothenate kinase 2, mitochondrial.
      
 0.505
Iqcf6
IQ domain-containing protein F6.
      
 0.504
Ccdc77
Coiled-coil domain containing 77.
   
  
 0.467
Cfap53
Cilia- and flagella-associated protein 53 isoform X1.
      
 0.461
LOC110338168
Gametogenetin-binding protein 1 isoform X1.
      
 0.461
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.