STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nxph4Neurexophilin-4. (304 aa)    
Predicted Functional Partners:
Nrxn1
Neurexin-1 isoform X1.
      
 0.733
Nrxn3
Neurexin 3.
      
 0.678
Nrxn2
Neurexin-2-beta isoform X1.
      
 0.677
Cbln1
Cerebellin-1.
      
 0.503
Cplx3
Complexin-3/4.
      
 0.476
Nrsn2
Neurensin-2.
      
 0.440
Cabp7
Calcium-binding protein 7.
      
 0.416
Rassf8
Ras association domain-containing protein 7/8.
      
 0.416
Thsd7b
Thrombospondin type-1 domain-containing protein 7B.
      
 0.416
Rnf39
RING finger protein 39.
  
   
 0.405
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.