STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
March9E3 ubiquitin-protein ligase MARCH4/9/11. (346 aa)    
Predicted Functional Partners:
Cnot2
CCR4-NOT transcription complex subunit 2 isoform X1.
   
 0.561
March10
Probable E3 ubiquitin-protein ligase MARCH10 isoform X1.
      
 0.549
Vcp
Transitional endoplasmic reticulum ATPase.
    
 0.455
Spata5
Spermatogenesis-associated protein 5 isoform X1.
    
 0.455
Zfp593
Bud site selection protein 20.
      
 0.418
MGP_PahariEiJ_P0041026
LOW QUALITY PROTEIN: FAS-associated factor 2-like.
   
 0.402
Ubxn8
UBX domain-containing protein 8.
   
 0.402
Faf1
FAS-associated factor 1.
   
 0.402
Nek9
NIMA (never in mitosis gene a)-related kinase 9.
   
 0.400
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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