Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cnot2 | March10 | MGP_PahariEiJ_P0087862 | MGP_PahariEiJ_P0037208 | CCR4-NOT transcription complex subunit 2 isoform X1. | Probable E3 ubiquitin-protein ligase MARCH10 isoform X1. | 0.561 |
Cnot2 | March9 | MGP_PahariEiJ_P0087862 | MGP_PahariEiJ_P0087699 | CCR4-NOT transcription complex subunit 2 isoform X1. | E3 ubiquitin-protein ligase MARCH4/9/11. | 0.561 |
Cnot2 | Spata5 | MGP_PahariEiJ_P0087862 | MGP_PahariEiJ_P0068399 | CCR4-NOT transcription complex subunit 2 isoform X1. | Spermatogenesis-associated protein 5 isoform X1. | 0.578 |
Cnot2 | Vcp | MGP_PahariEiJ_P0087862 | MGP_PahariEiJ_P0057627 | CCR4-NOT transcription complex subunit 2 isoform X1. | Transitional endoplasmic reticulum ATPase. | 0.578 |
Faf1 | MGP_PahariEiJ_P0041026 | MGP_PahariEiJ_P0078686 | MGP_PahariEiJ_P0041026 | FAS-associated factor 1. | LOW QUALITY PROTEIN: FAS-associated factor 2-like. | 0.792 |
Faf1 | March10 | MGP_PahariEiJ_P0078686 | MGP_PahariEiJ_P0037208 | FAS-associated factor 1. | Probable E3 ubiquitin-protein ligase MARCH10 isoform X1. | 0.402 |
Faf1 | March9 | MGP_PahariEiJ_P0078686 | MGP_PahariEiJ_P0087699 | FAS-associated factor 1. | E3 ubiquitin-protein ligase MARCH4/9/11. | 0.402 |
Faf1 | Spata5 | MGP_PahariEiJ_P0078686 | MGP_PahariEiJ_P0068399 | FAS-associated factor 1. | Spermatogenesis-associated protein 5 isoform X1. | 0.890 |
Faf1 | Vcp | MGP_PahariEiJ_P0078686 | MGP_PahariEiJ_P0057627 | FAS-associated factor 1. | Transitional endoplasmic reticulum ATPase. | 0.996 |
MGP_PahariEiJ_P0041026 | Faf1 | MGP_PahariEiJ_P0041026 | MGP_PahariEiJ_P0078686 | LOW QUALITY PROTEIN: FAS-associated factor 2-like. | FAS-associated factor 1. | 0.792 |
MGP_PahariEiJ_P0041026 | March10 | MGP_PahariEiJ_P0041026 | MGP_PahariEiJ_P0037208 | LOW QUALITY PROTEIN: FAS-associated factor 2-like. | Probable E3 ubiquitin-protein ligase MARCH10 isoform X1. | 0.402 |
MGP_PahariEiJ_P0041026 | March9 | MGP_PahariEiJ_P0041026 | MGP_PahariEiJ_P0087699 | LOW QUALITY PROTEIN: FAS-associated factor 2-like. | E3 ubiquitin-protein ligase MARCH4/9/11. | 0.402 |
MGP_PahariEiJ_P0041026 | Spata5 | MGP_PahariEiJ_P0041026 | MGP_PahariEiJ_P0068399 | LOW QUALITY PROTEIN: FAS-associated factor 2-like. | Spermatogenesis-associated protein 5 isoform X1. | 0.839 |
MGP_PahariEiJ_P0041026 | Ubxn8 | MGP_PahariEiJ_P0041026 | MGP_PahariEiJ_P0047045 | LOW QUALITY PROTEIN: FAS-associated factor 2-like. | UBX domain-containing protein 8. | 0.503 |
MGP_PahariEiJ_P0041026 | Vcp | MGP_PahariEiJ_P0041026 | MGP_PahariEiJ_P0057627 | LOW QUALITY PROTEIN: FAS-associated factor 2-like. | Transitional endoplasmic reticulum ATPase. | 0.994 |
March10 | Cnot2 | MGP_PahariEiJ_P0037208 | MGP_PahariEiJ_P0087862 | Probable E3 ubiquitin-protein ligase MARCH10 isoform X1. | CCR4-NOT transcription complex subunit 2 isoform X1. | 0.561 |
March10 | Faf1 | MGP_PahariEiJ_P0037208 | MGP_PahariEiJ_P0078686 | Probable E3 ubiquitin-protein ligase MARCH10 isoform X1. | FAS-associated factor 1. | 0.402 |
March10 | MGP_PahariEiJ_P0041026 | MGP_PahariEiJ_P0037208 | MGP_PahariEiJ_P0041026 | Probable E3 ubiquitin-protein ligase MARCH10 isoform X1. | LOW QUALITY PROTEIN: FAS-associated factor 2-like. | 0.402 |
March10 | March9 | MGP_PahariEiJ_P0037208 | MGP_PahariEiJ_P0087699 | Probable E3 ubiquitin-protein ligase MARCH10 isoform X1. | E3 ubiquitin-protein ligase MARCH4/9/11. | 0.549 |
March10 | Spata5 | MGP_PahariEiJ_P0037208 | MGP_PahariEiJ_P0068399 | Probable E3 ubiquitin-protein ligase MARCH10 isoform X1. | Spermatogenesis-associated protein 5 isoform X1. | 0.455 |
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