STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Myf5Myogenic factor 5. (255 aa)    
Predicted Functional Partners:
Tcf3
Transcription factor E2-alpha isoform X1.
   
 0.820
Myf6
Myogenic factor 6.
  
 
0.779
Pax7
Paired box protein Pax-7 isoform X1.
   
 
 0.760
Pax3
Paired box protein Pax-3 isoform X1.
   
 
 0.749
Mef2c
Myocyte-specific enhancer factor 2C isoform X1.
    
 0.697
Tcf12
Transcription factor 12 isoform X1.
   
 0.691
Tcf4
Transcription factor 4 isoform X1.
   
 0.691
Mstn
Growth differentiation factor 8.
   
  
 0.684
Cdh15
Cadherin 15, M-cadherin.
   
 
 0.664
Myh1
Myosin heavy chain 1.
   
  
 0.663
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.