STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ddx3xATP-dependent RNA helicase DDX3X isoform X1. (662 aa)    
Predicted Functional Partners:
Tbk1
Serine/threonine-protein kinase TBK1.
    
 0.961
D1Pas1
Putative ATP-dependent RNA helicase Pl10.
  
  
 
0.900
Nlrp3
NACHT, LRR and PYD domains-containing protein 3 isoform X1.
     
 0.878
MGP_PahariEiJ_P0020720
annotation not available
   
 0.839
MGP_PahariEiJ_P0020721
annotation not available
   
 0.839
Gsdmd
Gasdermin-D.
     
 0.838
Pycard
Apoptosis-associated speck-like protein containing a CARD.
    
 0.799
Aim2
Interferon-inducible protein AIM2.
    
 0.792
Casp1
Caspase 1.
    
 0.788
Nlrp6
NACHT, LRR and PYD domains-containing protein 6 isoform X1.
     
 0.780
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.