Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dctn5 | Gfod1 | MGP_PahariEiJ_P0018752 | MGP_PahariEiJ_P0040805 | Dynactin subunit 5. | Glucose-fructose oxidoreductase domain-containing protein 1. | 0.418 |
Dctn5 | Pdzd4 | MGP_PahariEiJ_P0018752 | MGP_PahariEiJ_P0089360 | Dynactin subunit 5. | PDZ domain-containing protein 4 isoform X1. | 0.476 |
Gfod1 | Dctn5 | MGP_PahariEiJ_P0040805 | MGP_PahariEiJ_P0018752 | Glucose-fructose oxidoreductase domain-containing protein 1. | Dynactin subunit 5. | 0.418 |
Gfod1 | Pdzd4 | MGP_PahariEiJ_P0040805 | MGP_PahariEiJ_P0089360 | Glucose-fructose oxidoreductase domain-containing protein 1. | PDZ domain-containing protein 4 isoform X1. | 0.456 |
Nudcd3 | Pdzd4 | MGP_PahariEiJ_P0030366 | MGP_PahariEiJ_P0089360 | NudC domain-containing protein 3 isoform X1. | PDZ domain-containing protein 4 isoform X1. | 0.476 |
Nudcd3 | Wdr54 | MGP_PahariEiJ_P0030366 | MGP_PahariEiJ_P0050618 | NudC domain-containing protein 3 isoform X1. | WD repeat-containing protein 54 isoform X1. | 0.420 |
Pdzd3 | Pdzd4 | MGP_PahariEiJ_P0023176 | MGP_PahariEiJ_P0089360 | Na(+)/H(+) exchange regulatory cofactor NHE-RF4 isoform X1. | PDZ domain-containing protein 4 isoform X1. | 0.497 |
Pdzd4 | Dctn5 | MGP_PahariEiJ_P0089360 | MGP_PahariEiJ_P0018752 | PDZ domain-containing protein 4 isoform X1. | Dynactin subunit 5. | 0.476 |
Pdzd4 | Gfod1 | MGP_PahariEiJ_P0089360 | MGP_PahariEiJ_P0040805 | PDZ domain-containing protein 4 isoform X1. | Glucose-fructose oxidoreductase domain-containing protein 1. | 0.456 |
Pdzd4 | Nudcd3 | MGP_PahariEiJ_P0089360 | MGP_PahariEiJ_P0030366 | PDZ domain-containing protein 4 isoform X1. | NudC domain-containing protein 3 isoform X1. | 0.476 |
Pdzd4 | Pdzd3 | MGP_PahariEiJ_P0089360 | MGP_PahariEiJ_P0023176 | PDZ domain-containing protein 4 isoform X1. | Na(+)/H(+) exchange regulatory cofactor NHE-RF4 isoform X1. | 0.497 |
Pdzd4 | Plekhf1 | MGP_PahariEiJ_P0089360 | MGP_PahariEiJ_P0015979 | PDZ domain-containing protein 4 isoform X1. | Pleckstrin homology domain-containing family F member 1. | 0.400 |
Pdzd4 | Taf3 | MGP_PahariEiJ_P0089360 | MGP_PahariEiJ_P0040070 | PDZ domain-containing protein 4 isoform X1. | Transcription initiation factor TFIID subunit 3. | 0.457 |
Pdzd4 | Tsen54 | MGP_PahariEiJ_P0089360 | MGP_PahariEiJ_P0037726 | PDZ domain-containing protein 4 isoform X1. | TRNA-splicing endonuclease subunit Sen54. | 0.420 |
Pdzd4 | Wdr54 | MGP_PahariEiJ_P0089360 | MGP_PahariEiJ_P0050618 | PDZ domain-containing protein 4 isoform X1. | WD repeat-containing protein 54 isoform X1. | 0.483 |
Plekhf1 | Pdzd4 | MGP_PahariEiJ_P0015979 | MGP_PahariEiJ_P0089360 | Pleckstrin homology domain-containing family F member 1. | PDZ domain-containing protein 4 isoform X1. | 0.400 |
Taf3 | Pdzd4 | MGP_PahariEiJ_P0040070 | MGP_PahariEiJ_P0089360 | Transcription initiation factor TFIID subunit 3. | PDZ domain-containing protein 4 isoform X1. | 0.457 |
Tsen54 | Pdzd4 | MGP_PahariEiJ_P0037726 | MGP_PahariEiJ_P0089360 | TRNA-splicing endonuclease subunit Sen54. | PDZ domain-containing protein 4 isoform X1. | 0.420 |
Wdr54 | Nudcd3 | MGP_PahariEiJ_P0050618 | MGP_PahariEiJ_P0030366 | WD repeat-containing protein 54 isoform X1. | NudC domain-containing protein 3 isoform X1. | 0.420 |
Wdr54 | Pdzd4 | MGP_PahariEiJ_P0050618 | MGP_PahariEiJ_P0089360 | WD repeat-containing protein 54 isoform X1. | PDZ domain-containing protein 4 isoform X1. | 0.483 |