Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Alcam | Cntn2 | MGP_PahariEiJ_P0029216 | MGP_PahariEiJ_P0075126 | Activated leukocyte cell adhesion molecule. | Contactin 2. | 0.449 |
Alcam | L1cam | MGP_PahariEiJ_P0029216 | MGP_PahariEiJ_P0089363 | Activated leukocyte cell adhesion molecule. | Neural cell adhesion molecule L1 isoform X1. | 0.823 |
Alcam | Ncam1 | MGP_PahariEiJ_P0029216 | MGP_PahariEiJ_P0023404 | Activated leukocyte cell adhesion molecule. | Neural cell adhesion molecule 1 isoform X1. | 0.545 |
Ank1 | Ank3 | MGP_PahariEiJ_P0046862 | MGP_PahariEiJ_P0086459 | Ankyrin-1 isoform X1. | Ankyrin-3 isoform X1. | 0.916 |
Ank1 | Ezr | MGP_PahariEiJ_P0046862 | MGP_PahariEiJ_P0054915 | Ankyrin-1 isoform X1. | Ezrin isoform X1. | 0.506 |
Ank1 | L1cam | MGP_PahariEiJ_P0046862 | MGP_PahariEiJ_P0089363 | Ankyrin-1 isoform X1. | Neural cell adhesion molecule L1 isoform X1. | 0.890 |
Ank1 | Src | MGP_PahariEiJ_P0046862 | MGP_PahariEiJ_P0066760 | Ankyrin-1 isoform X1. | Proto-oncogene tyrosine-protein kinase Src isoform X1. | 0.463 |
Ank3 | Ank1 | MGP_PahariEiJ_P0086459 | MGP_PahariEiJ_P0046862 | Ankyrin-3 isoform X1. | Ankyrin-1 isoform X1. | 0.916 |
Ank3 | Cntn2 | MGP_PahariEiJ_P0086459 | MGP_PahariEiJ_P0075126 | Ankyrin-3 isoform X1. | Contactin 2. | 0.624 |
Ank3 | Ezr | MGP_PahariEiJ_P0086459 | MGP_PahariEiJ_P0054915 | Ankyrin-3 isoform X1. | Ezrin isoform X1. | 0.587 |
Ank3 | L1cam | MGP_PahariEiJ_P0086459 | MGP_PahariEiJ_P0089363 | Ankyrin-3 isoform X1. | Neural cell adhesion molecule L1 isoform X1. | 0.833 |
Ank3 | Src | MGP_PahariEiJ_P0086459 | MGP_PahariEiJ_P0066760 | Ankyrin-3 isoform X1. | Proto-oncogene tyrosine-protein kinase Src isoform X1. | 0.528 |
Cntn2 | Alcam | MGP_PahariEiJ_P0075126 | MGP_PahariEiJ_P0029216 | Contactin 2. | Activated leukocyte cell adhesion molecule. | 0.449 |
Cntn2 | Ank3 | MGP_PahariEiJ_P0075126 | MGP_PahariEiJ_P0086459 | Contactin 2. | Ankyrin-3 isoform X1. | 0.624 |
Cntn2 | L1cam | MGP_PahariEiJ_P0075126 | MGP_PahariEiJ_P0089363 | Contactin 2. | Neural cell adhesion molecule L1 isoform X1. | 0.990 |
Cntn2 | Ncam1 | MGP_PahariEiJ_P0075126 | MGP_PahariEiJ_P0023404 | Contactin 2. | Neural cell adhesion molecule 1 isoform X1. | 0.714 |
Cntn2 | Ncam2 | MGP_PahariEiJ_P0075126 | MGP_PahariEiJ_P0029449 | Contactin 2. | Neural cell adhesion molecule 2 isoform X1. | 0.569 |
Cntn2 | Nrp1 | MGP_PahariEiJ_P0075126 | MGP_PahariEiJ_P0054852 | Contactin 2. | Neuropilin-1 isoform X1. | 0.785 |
Egfr | Ezr | MGP_PahariEiJ_P0030207 | MGP_PahariEiJ_P0054915 | Epidermal growth factor receptor isoform X1. | Ezrin isoform X1. | 0.648 |
Egfr | L1cam | MGP_PahariEiJ_P0030207 | MGP_PahariEiJ_P0089363 | Epidermal growth factor receptor isoform X1. | Neural cell adhesion molecule L1 isoform X1. | 0.960 |
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