STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Opn1mwLong/medium wavelength-sensitive opsin. (389 aa)    
Predicted Functional Partners:
Opn1sw
Short-wave-sensitive opsin 1 isoform X1.
   
 
0.848
Gnat2
Guanine nucleotide-binding protein G(t) subunit alpha 1/2.
   
 0.819
Gnat1
Guanine nucleotide-binding protein G(t) subunit alpha 1/2.
   
 0.810
Arr3
Arrestin-C.
   
 0.776
Gngt2
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2.
   
 0.700
Crx
Cone-rod homeobox protein.
   
  
 0.689
Rcvrn
Recoverin.
   
 0.674
Gngt1
Guanine nucleotide-binding protein G(T) subunit gamma-T1.
   
 0.639
Rgr
RPE-retinal G protein-coupled receptor isoform X1.
   
 
0.632
Gnb3
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 isoform X1.
   
 0.623
Your Current Organism:
Mus pahari
NCBI taxonomy Id: 10093
Other names: Coelomys parahi, M. pahari, shrew mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.