Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ccdc40 | Ripply1 | MGP_PahariEiJ_P0038100 | MGP_PahariEiJ_P0090436 | Coiled-coil domain-containing protein 40. | Protein ripply1. | 0.420 |
Mesp2 | Ripply1 | MGP_PahariEiJ_P0017127 | MGP_PahariEiJ_P0090436 | Mesoderm posterior protein 2. | Protein ripply1. | 0.569 |
Mesp2 | Tbx6 | MGP_PahariEiJ_P0017127 | MGP_PahariEiJ_P0019028 | Mesoderm posterior protein 2. | T-box transcription factor TBX6. | 0.768 |
Mesp2 | Uncx | MGP_PahariEiJ_P0017127 | MGP_PahariEiJ_P0060019 | Mesoderm posterior protein 2. | Homeobox protein unc-4 homolog. | 0.630 |
Mymx | Ripply1 | MGP_PahariEiJ_P0044432 | MGP_PahariEiJ_P0090436 | LOW QUALITY PROTEIN: uncharacterized LOC101929726 homolog. | Protein ripply1. | 0.495 |
Pbx4 | Ripply1 | MGP_PahariEiJ_P0047544 | MGP_PahariEiJ_P0090436 | Pre-B-cell leukemia transcription factor 4. | Protein ripply1. | 0.516 |
Ripply1 | Ccdc40 | MGP_PahariEiJ_P0090436 | MGP_PahariEiJ_P0038100 | Protein ripply1. | Coiled-coil domain-containing protein 40. | 0.420 |
Ripply1 | Mesp2 | MGP_PahariEiJ_P0090436 | MGP_PahariEiJ_P0017127 | Protein ripply1. | Mesoderm posterior protein 2. | 0.569 |
Ripply1 | Mymx | MGP_PahariEiJ_P0090436 | MGP_PahariEiJ_P0044432 | Protein ripply1. | LOW QUALITY PROTEIN: uncharacterized LOC101929726 homolog. | 0.495 |
Ripply1 | Pbx4 | MGP_PahariEiJ_P0090436 | MGP_PahariEiJ_P0047544 | Protein ripply1. | Pre-B-cell leukemia transcription factor 4. | 0.516 |
Ripply1 | Tbx6 | MGP_PahariEiJ_P0090436 | MGP_PahariEiJ_P0019028 | Protein ripply1. | T-box transcription factor TBX6. | 0.503 |
Ripply1 | Tle1 | MGP_PahariEiJ_P0090436 | MGP_PahariEiJ_P0077838 | Protein ripply1. | Transducin-like enhancer protein 1 isoform X1. | 0.534 |
Ripply1 | Tle3 | MGP_PahariEiJ_P0090436 | MGP_PahariEiJ_P0023848 | Protein ripply1. | Transducin-like enhancer protein 3 isoform X1. | 0.423 |
Ripply1 | Tle5 | MGP_PahariEiJ_P0090436 | MGP_PahariEiJ_P0087329 | Protein ripply1. | Amino-terminal enhancer of split isoform X1. | 0.537 |
Ripply1 | Uncx | MGP_PahariEiJ_P0090436 | MGP_PahariEiJ_P0060019 | Protein ripply1. | Homeobox protein unc-4 homolog. | 0.459 |
Tbx6 | Mesp2 | MGP_PahariEiJ_P0019028 | MGP_PahariEiJ_P0017127 | T-box transcription factor TBX6. | Mesoderm posterior protein 2. | 0.768 |
Tbx6 | Ripply1 | MGP_PahariEiJ_P0019028 | MGP_PahariEiJ_P0090436 | T-box transcription factor TBX6. | Protein ripply1. | 0.503 |
Tbx6 | Uncx | MGP_PahariEiJ_P0019028 | MGP_PahariEiJ_P0060019 | T-box transcription factor TBX6. | Homeobox protein unc-4 homolog. | 0.511 |
Tle1 | Ripply1 | MGP_PahariEiJ_P0077838 | MGP_PahariEiJ_P0090436 | Transducin-like enhancer protein 1 isoform X1. | Protein ripply1. | 0.534 |
Tle1 | Tle3 | MGP_PahariEiJ_P0077838 | MGP_PahariEiJ_P0023848 | Transducin-like enhancer protein 1 isoform X1. | Transducin-like enhancer protein 3 isoform X1. | 0.901 |
page 1 of 2