STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO_10199Hypothetical protein. (308 aa)    
Predicted Functional Partners:
ALO_10184
Hypothetical protein.
 
     0.846
ALO_10194
CsgG family protein; COG1462 Uncharacterized protein involved in formation of curli polymers.
 
   
 0.791
ALO_10024
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.747
flgI
Flagellar basal body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
  
 0.724
ALO_10179
COG1462 Uncharacterized protein involved in formation of curli polymers.
 
   
 0.613
ALO_15327
Radical SAM domain protein; COG1032 Fe-S oxidoreductase.
  
     0.582
ALO_10189
Hypothetical protein.
       0.550
ALO_14047
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.531
ALO_06758
COG1843 Flagellar hook capping protein.
  
  
 0.519
ALO_14102
COG1843 Flagellar hook capping protein.
  
  
 0.519
Your Current Organism:
Acetonema longum
NCBI taxonomy Id: 1009370
Other names: A. longum DSM 6540, Acetonema longum APO-1, Acetonema longum DSM 6540, Acetonema longum str. DSM 6540, Acetonema longum strain DSM 6540
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.