STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000383715_03293Unannotated protein. (331 aa)    
Predicted Functional Partners:
GCA_000383715_02842
Unannotated protein.
  
     0.699
GCA_000383715_00064
Unannotated protein.
 
     0.673
GCA_000383715_03292
Unannotated protein.
       0.623
GCA_000383715_03244
Unannotated protein.
 
     0.602
GCA_000383715_02254
Unannotated protein.
 
     0.593
GCA_000383715_01880
Unannotated protein.
 
  
 0.578
GCA_000383715_00685
Unannotated protein.
  
     0.556
GCA_000383715_01108
Unannotated protein.
  
     0.551
GCA_000383715_00343
Unannotated protein.
  
     0.526
GCA_000383715_03263
Unannotated protein.
  
     0.519
Your Current Organism:
Verrucomicrobia bacterium SCGC AAA164E04
NCBI taxonomy Id: 1009415
Other names: V. bacterium SCGC AAA164-E04, Verrucomicrobia bacterium SCGC AAA164-E04
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.