STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000385055_00200Unannotated protein. (203 aa)    
Predicted Functional Partners:
GCA_000385055_00295
Unannotated protein.
 0.999
GCA_000385055_00296
Unannotated protein.
 
 0.999
GCA_000385055_00294
Unannotated protein.
 
 0.990
GCA_000385055_00201
Unannotated protein.
       0.784
GCA_000385055_00202
Unannotated protein.
       0.773
GCA_000385055_01113
Unannotated protein.
  
 
 0.728
GCA_000385055_00588
Unannotated protein.
  
    0.694
GCA_000385055_00203
Unannotated protein.
       0.661
GCA_000385055_00190
Unannotated protein.
   
    0.632
GCA_000385055_00204
Unannotated protein.
       0.570
Your Current Organism:
gamma proteobacterium SCGC AAA168P09
NCBI taxonomy Id: 1009426
Other names: g. proteobacterium SCGC AAA168-P09, gamma proteobacterium SCGC AAA168-P09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.