Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Inppl1 | Met | MGP_SPRETEiJ_P0084387 | MGP_SPRETEiJ_P0075528 | Inositol polyphosphate phosphatase-like 1. | Met proto-oncogene. | 0.481 |
Inppl1 | Mst1r | MGP_SPRETEiJ_P0084387 | MGP_SPRETEiJ_P0093519 | Inositol polyphosphate phosphatase-like 1. | Macrophage stimulating 1 receptor (c-met-related tyrosine kinase). | 0.481 |
Inppl1 | Tns1 | MGP_SPRETEiJ_P0084387 | MGP_SPRETEiJ_P0019231 | Inositol polyphosphate phosphatase-like 1. | Tensin 1. | 0.761 |
Itgb1 | Itgb2 | MGP_SPRETEiJ_P0090142 | MGP_SPRETEiJ_P0024712 | Integrin beta 1 (fibronectin receptor beta). | Integrin beta 2. | 0.968 |
Itgb1 | Itgb3 | MGP_SPRETEiJ_P0090142 | MGP_SPRETEiJ_P0031902 | Integrin beta 1 (fibronectin receptor beta). | Integrin beta 3. | 0.974 |
Itgb1 | Itgb6 | MGP_SPRETEiJ_P0090142 | MGP_SPRETEiJ_P0053980 | Integrin beta 1 (fibronectin receptor beta). | Integrin beta 6. | 0.944 |
Itgb1 | Itgb8 | MGP_SPRETEiJ_P0090142 | MGP_SPRETEiJ_P0035108 | Integrin beta 1 (fibronectin receptor beta). | Integrin beta 8. | 0.957 |
Itgb1 | Met | MGP_SPRETEiJ_P0090142 | MGP_SPRETEiJ_P0075528 | Integrin beta 1 (fibronectin receptor beta). | Met proto-oncogene. | 0.849 |
Itgb1 | Mst1r | MGP_SPRETEiJ_P0090142 | MGP_SPRETEiJ_P0093519 | Integrin beta 1 (fibronectin receptor beta). | Macrophage stimulating 1 receptor (c-met-related tyrosine kinase). | 0.750 |
Itgb1 | Ptk2 | MGP_SPRETEiJ_P0090142 | MGP_SPRETEiJ_P0040208 | Integrin beta 1 (fibronectin receptor beta). | PTK2 protein tyrosine kinase 2. | 0.997 |
Itgb1 | Tns1 | MGP_SPRETEiJ_P0090142 | MGP_SPRETEiJ_P0019231 | Integrin beta 1 (fibronectin receptor beta). | Tensin 1. | 0.897 |
Itgb2 | Itgb1 | MGP_SPRETEiJ_P0024712 | MGP_SPRETEiJ_P0090142 | Integrin beta 2. | Integrin beta 1 (fibronectin receptor beta). | 0.968 |
Itgb2 | Itgb3 | MGP_SPRETEiJ_P0024712 | MGP_SPRETEiJ_P0031902 | Integrin beta 2. | Integrin beta 3. | 0.953 |
Itgb2 | Itgb6 | MGP_SPRETEiJ_P0024712 | MGP_SPRETEiJ_P0053980 | Integrin beta 2. | Integrin beta 6. | 0.933 |
Itgb2 | Itgb8 | MGP_SPRETEiJ_P0024712 | MGP_SPRETEiJ_P0035108 | Integrin beta 2. | Integrin beta 8. | 0.906 |
Itgb2 | Met | MGP_SPRETEiJ_P0024712 | MGP_SPRETEiJ_P0075528 | Integrin beta 2. | Met proto-oncogene. | 0.643 |
Itgb2 | Mst1r | MGP_SPRETEiJ_P0024712 | MGP_SPRETEiJ_P0093519 | Integrin beta 2. | Macrophage stimulating 1 receptor (c-met-related tyrosine kinase). | 0.627 |
Itgb2 | Ptk2 | MGP_SPRETEiJ_P0024712 | MGP_SPRETEiJ_P0040208 | Integrin beta 2. | PTK2 protein tyrosine kinase 2. | 0.882 |
Itgb2 | Tns1 | MGP_SPRETEiJ_P0024712 | MGP_SPRETEiJ_P0019231 | Integrin beta 2. | Tensin 1. | 0.736 |
Itgb3 | Itgb1 | MGP_SPRETEiJ_P0031902 | MGP_SPRETEiJ_P0090142 | Integrin beta 3. | Integrin beta 1 (fibronectin receptor beta). | 0.974 |
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