Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lyrm4 | Mre11a | MGP_SPRETEiJ_P0035716 | MGP_SPRETEiJ_P0090300 | LYR motif containing 4. | MRE11A homolog A, double strand break repair nuclease. | 0.984 |
Lyrm4 | Rhbdd1 | MGP_SPRETEiJ_P0035716 | MGP_SPRETEiJ_P0019673 | LYR motif containing 4. | Rhomboid domain containing 1. | 0.585 |
Lyrm4 | Rhbdd2 | MGP_SPRETEiJ_P0035716 | MGP_SPRETEiJ_P0074083 | LYR motif containing 4. | Rhomboid domain containing 2. | 0.585 |
Lyrm4 | Rhbdd3 | MGP_SPRETEiJ_P0035716 | MGP_SPRETEiJ_P0026835 | LYR motif containing 4. | Rhomboid domain containing 3. | 0.585 |
Mre11a | Lyrm4 | MGP_SPRETEiJ_P0090300 | MGP_SPRETEiJ_P0035716 | MRE11A homolog A, double strand break repair nuclease. | LYR motif containing 4. | 0.984 |
Mre11a | Rhbdd1 | MGP_SPRETEiJ_P0090300 | MGP_SPRETEiJ_P0019673 | MRE11A homolog A, double strand break repair nuclease. | Rhomboid domain containing 1. | 0.554 |
Mre11a | Rhbdd2 | MGP_SPRETEiJ_P0090300 | MGP_SPRETEiJ_P0074083 | MRE11A homolog A, double strand break repair nuclease. | Rhomboid domain containing 2. | 0.554 |
Mre11a | Rhbdd3 | MGP_SPRETEiJ_P0090300 | MGP_SPRETEiJ_P0026835 | MRE11A homolog A, double strand break repair nuclease. | Rhomboid domain containing 3. | 0.554 |
Mre11a | Vcp | MGP_SPRETEiJ_P0090300 | MGP_SPRETEiJ_P0064367 | MRE11A homolog A, double strand break repair nuclease. | Valosin containing protein. | 0.462 |
Popdc2 | Rhbdd1 | MGP_SPRETEiJ_P0043454 | MGP_SPRETEiJ_P0019673 | Popeye domain containing 2. | Rhomboid domain containing 1. | 0.489 |
Rhbdd1 | Lyrm4 | MGP_SPRETEiJ_P0019673 | MGP_SPRETEiJ_P0035716 | Rhomboid domain containing 1. | LYR motif containing 4. | 0.585 |
Rhbdd1 | Mre11a | MGP_SPRETEiJ_P0019673 | MGP_SPRETEiJ_P0090300 | Rhomboid domain containing 1. | MRE11A homolog A, double strand break repair nuclease. | 0.554 |
Rhbdd1 | Popdc2 | MGP_SPRETEiJ_P0019673 | MGP_SPRETEiJ_P0043454 | Rhomboid domain containing 1. | Popeye domain containing 2. | 0.489 |
Rhbdd1 | Rhbdd2 | MGP_SPRETEiJ_P0019673 | MGP_SPRETEiJ_P0074083 | Rhomboid domain containing 1. | Rhomboid domain containing 2. | 0.516 |
Rhbdd1 | Rhbdd3 | MGP_SPRETEiJ_P0019673 | MGP_SPRETEiJ_P0026835 | Rhomboid domain containing 1. | Rhomboid domain containing 3. | 0.493 |
Rhbdd1 | Rhbdl1 | MGP_SPRETEiJ_P0019673 | MGP_SPRETEiJ_P0045250 | Rhomboid domain containing 1. | Rhomboid like 1. | 0.616 |
Rhbdd1 | Rhbdl2 | MGP_SPRETEiJ_P0019673 | MGP_SPRETEiJ_P0066774 | Rhomboid domain containing 1. | Rhomboid like 2. | 0.516 |
Rhbdd1 | Rhbdl3 | MGP_SPRETEiJ_P0019673 | MGP_SPRETEiJ_P0030100 | Rhomboid domain containing 1. | Rhomboid like 3. | 0.521 |
Rhbdd1 | Spata5 | MGP_SPRETEiJ_P0019673 | MGP_SPRETEiJ_P0059701 | Rhomboid domain containing 1. | Spermatogenesis associated 5. | 0.720 |
Rhbdd1 | Vcp | MGP_SPRETEiJ_P0019673 | MGP_SPRETEiJ_P0064367 | Rhomboid domain containing 1. | Valosin containing protein. | 0.901 |
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