Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Clptm1 | Insyn1 | MGP_SPRETEiJ_P0081111 | MGP_SPRETEiJ_P0091727 | Cleft lip and palate associated transmembrane protein 1. | Inhibitory synaptic factor 1. | 0.508 |
Clptm1 | Itm2c | MGP_SPRETEiJ_P0081111 | MGP_SPRETEiJ_P0019783 | Cleft lip and palate associated transmembrane protein 1. | Integral membrane protein 2C. | 0.517 |
D630003M21Rik | Itm2c | MGP_SPRETEiJ_P0057981 | MGP_SPRETEiJ_P0019783 | RIKEN cDNA D630003M21 gene. | Integral membrane protein 2C. | 0.449 |
Ghitm | Itm2c | MGP_SPRETEiJ_P0037981 | MGP_SPRETEiJ_P0019783 | Growth hormone inducible transmembrane protein. | Integral membrane protein 2C. | 0.438 |
Insyn1 | Clptm1 | MGP_SPRETEiJ_P0091727 | MGP_SPRETEiJ_P0081111 | Inhibitory synaptic factor 1. | Cleft lip and palate associated transmembrane protein 1. | 0.508 |
Insyn1 | Itm2c | MGP_SPRETEiJ_P0091727 | MGP_SPRETEiJ_P0019783 | Inhibitory synaptic factor 1. | Integral membrane protein 2C. | 0.402 |
Itm2c | Clptm1 | MGP_SPRETEiJ_P0019783 | MGP_SPRETEiJ_P0081111 | Integral membrane protein 2C. | Cleft lip and palate associated transmembrane protein 1. | 0.517 |
Itm2c | D630003M21Rik | MGP_SPRETEiJ_P0019783 | MGP_SPRETEiJ_P0057981 | Integral membrane protein 2C. | RIKEN cDNA D630003M21 gene. | 0.449 |
Itm2c | Ghitm | MGP_SPRETEiJ_P0019783 | MGP_SPRETEiJ_P0037981 | Integral membrane protein 2C. | Growth hormone inducible transmembrane protein. | 0.438 |
Itm2c | Insyn1 | MGP_SPRETEiJ_P0019783 | MGP_SPRETEiJ_P0091727 | Integral membrane protein 2C. | Inhibitory synaptic factor 1. | 0.402 |
Itm2c | Pdzd11 | MGP_SPRETEiJ_P0019783 | MGP_SPRETEiJ_P0096026 | Integral membrane protein 2C. | PDZ domain containing 11. | 0.424 |
Itm2c | Plekhf2 | MGP_SPRETEiJ_P0019783 | MGP_SPRETEiJ_P0063836 | Integral membrane protein 2C. | Pleckstrin homology domain containing, family F (with FYVE domain) member 2. | 0.402 |
Itm2c | Slc35a5 | MGP_SPRETEiJ_P0019783 | MGP_SPRETEiJ_P0043615 | Integral membrane protein 2C. | Solute carrier family 35, member A5. | 0.436 |
Pdzd11 | Itm2c | MGP_SPRETEiJ_P0096026 | MGP_SPRETEiJ_P0019783 | PDZ domain containing 11. | Integral membrane protein 2C. | 0.424 |
Plekhf2 | Itm2c | MGP_SPRETEiJ_P0063836 | MGP_SPRETEiJ_P0019783 | Pleckstrin homology domain containing, family F (with FYVE domain) member 2. | Integral membrane protein 2C. | 0.402 |
Slc35a5 | Itm2c | MGP_SPRETEiJ_P0043615 | MGP_SPRETEiJ_P0019783 | Solute carrier family 35, member A5. | Integral membrane protein 2C. | 0.436 |