Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ambp | F10 | MGP_SPRETEiJ_P0065103 | MGP_SPRETEiJ_P0087230 | Alpha 1 microglobulin/bikunin precursor. | Coagulation factor X. | 0.406 |
Ambp | F11 | MGP_SPRETEiJ_P0065103 | MGP_SPRETEiJ_P0087774 | Alpha 1 microglobulin/bikunin precursor. | Coagulation factor XI. | 0.528 |
Ambp | F12 | MGP_SPRETEiJ_P0065103 | MGP_SPRETEiJ_P0036150 | Alpha 1 microglobulin/bikunin precursor. | Coagulation factor XII (Hageman factor). | 0.560 |
Ambp | F2 | MGP_SPRETEiJ_P0065103 | MGP_SPRETEiJ_P0055184 | Alpha 1 microglobulin/bikunin precursor. | Coagulation factor II. | 0.963 |
Ambp | F9 | MGP_SPRETEiJ_P0065103 | MGP_SPRETEiJ_P0095296 | Alpha 1 microglobulin/bikunin precursor. | Coagulation factor IX. | 0.405 |
Ambp | Fga | MGP_SPRETEiJ_P0065103 | MGP_SPRETEiJ_P0060462 | Alpha 1 microglobulin/bikunin precursor. | Fibrinogen alpha chain. | 0.948 |
Ambp | Fgb | MGP_SPRETEiJ_P0065103 | MGP_SPRETEiJ_P0060463 | Alpha 1 microglobulin/bikunin precursor. | Fibrinogen beta chain. | 0.900 |
Ambp | Plg | MGP_SPRETEiJ_P0065103 | MGP_SPRETEiJ_P0044595 | Alpha 1 microglobulin/bikunin precursor. | Plasminogen. | 0.911 |
Ambp | Proc | MGP_SPRETEiJ_P0065103 | MGP_SPRETEiJ_P0048156 | Alpha 1 microglobulin/bikunin precursor. | Protein C. | 0.547 |
Ambp | Serpinc1 | MGP_SPRETEiJ_P0065103 | MGP_SPRETEiJ_P0021755 | Alpha 1 microglobulin/bikunin precursor. | Serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1. | 0.942 |
F10 | Ambp | MGP_SPRETEiJ_P0087230 | MGP_SPRETEiJ_P0065103 | Coagulation factor X. | Alpha 1 microglobulin/bikunin precursor. | 0.406 |
F10 | F11 | MGP_SPRETEiJ_P0087230 | MGP_SPRETEiJ_P0087774 | Coagulation factor X. | Coagulation factor XI. | 0.802 |
F10 | F12 | MGP_SPRETEiJ_P0087230 | MGP_SPRETEiJ_P0036150 | Coagulation factor X. | Coagulation factor XII (Hageman factor). | 0.431 |
F10 | F2 | MGP_SPRETEiJ_P0087230 | MGP_SPRETEiJ_P0055184 | Coagulation factor X. | Coagulation factor II. | 0.983 |
F10 | F9 | MGP_SPRETEiJ_P0087230 | MGP_SPRETEiJ_P0095296 | Coagulation factor X. | Coagulation factor IX. | 0.949 |
F10 | Fga | MGP_SPRETEiJ_P0087230 | MGP_SPRETEiJ_P0060462 | Coagulation factor X. | Fibrinogen alpha chain. | 0.568 |
F10 | Fgb | MGP_SPRETEiJ_P0087230 | MGP_SPRETEiJ_P0060463 | Coagulation factor X. | Fibrinogen beta chain. | 0.526 |
F10 | Proc | MGP_SPRETEiJ_P0087230 | MGP_SPRETEiJ_P0048156 | Coagulation factor X. | Protein C. | 0.812 |
F10 | Serpinc1 | MGP_SPRETEiJ_P0087230 | MGP_SPRETEiJ_P0021755 | Coagulation factor X. | Serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1. | 0.995 |
F11 | Ambp | MGP_SPRETEiJ_P0087774 | MGP_SPRETEiJ_P0065103 | Coagulation factor XI. | Alpha 1 microglobulin/bikunin precursor. | 0.528 |
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