Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Commd4 | Cul1 | MGP_SPRETEiJ_P0091640 | MGP_SPRETEiJ_P0076441 | COMM domain containing 4. | Cullin 1. | 0.712 |
Commd4 | Fau | MGP_SPRETEiJ_P0091640 | MGP_SPRETEiJ_P0049673 | COMM domain containing 4. | Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived). | 0.401 |
Commd4 | Fbxo30 | MGP_SPRETEiJ_P0091640 | MGP_SPRETEiJ_P0023381 | COMM domain containing 4. | F-box protein 30. | 0.571 |
Commd4 | MGP_SPRETEiJ_P0049674 | MGP_SPRETEiJ_P0091640 | MGP_SPRETEiJ_P0049674 | COMM domain containing 4. | annotation not available | 0.401 |
Commd4 | Nedd8 | MGP_SPRETEiJ_P0091640 | MGP_SPRETEiJ_P0038607 | COMM domain containing 4. | Neural precursor cell expressed, developmentally down-regulated gene 8. | 0.734 |
Commd4 | Skp1a | MGP_SPRETEiJ_P0091640 | MGP_SPRETEiJ_P0027955 | COMM domain containing 4. | S-phase kinase-associated protein 1A. | 0.676 |
Cul1 | Commd4 | MGP_SPRETEiJ_P0076441 | MGP_SPRETEiJ_P0091640 | Cullin 1. | COMM domain containing 4. | 0.712 |
Cul1 | Fau | MGP_SPRETEiJ_P0076441 | MGP_SPRETEiJ_P0049673 | Cullin 1. | Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived). | 0.640 |
Cul1 | Fbxo30 | MGP_SPRETEiJ_P0076441 | MGP_SPRETEiJ_P0023381 | Cullin 1. | F-box protein 30. | 0.700 |
Cul1 | MGP_SPRETEiJ_P0049674 | MGP_SPRETEiJ_P0076441 | MGP_SPRETEiJ_P0049674 | Cullin 1. | annotation not available | 0.640 |
Cul1 | Nedd8 | MGP_SPRETEiJ_P0076441 | MGP_SPRETEiJ_P0038607 | Cullin 1. | Neural precursor cell expressed, developmentally down-regulated gene 8. | 0.997 |
Cul1 | Skp1a | MGP_SPRETEiJ_P0076441 | MGP_SPRETEiJ_P0027955 | Cullin 1. | S-phase kinase-associated protein 1A. | 0.999 |
Fau | Commd4 | MGP_SPRETEiJ_P0049673 | MGP_SPRETEiJ_P0091640 | Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived). | COMM domain containing 4. | 0.401 |
Fau | Cul1 | MGP_SPRETEiJ_P0049673 | MGP_SPRETEiJ_P0076441 | Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived). | Cullin 1. | 0.640 |
Fau | Fbxo30 | MGP_SPRETEiJ_P0049673 | MGP_SPRETEiJ_P0023381 | Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived). | F-box protein 30. | 0.911 |
Fau | MGP_SPRETEiJ_P0049674 | MGP_SPRETEiJ_P0049673 | MGP_SPRETEiJ_P0049674 | Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived). | annotation not available | 0.993 |
Fau | MGP_SPRETEiJ_P0081290 | MGP_SPRETEiJ_P0049673 | MGP_SPRETEiJ_P0081290 | Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived). | annotation not available | 0.999 |
Fau | Nedd8 | MGP_SPRETEiJ_P0049673 | MGP_SPRETEiJ_P0038607 | Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived). | Neural precursor cell expressed, developmentally down-regulated gene 8. | 0.818 |
Fau | Rps11 | MGP_SPRETEiJ_P0049673 | MGP_SPRETEiJ_P0082765 | Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived). | Ribosomal protein S11. | 0.999 |
Fau | Skp1a | MGP_SPRETEiJ_P0049673 | MGP_SPRETEiJ_P0027955 | Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived). | S-phase kinase-associated protein 1A. | 0.828 |
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