STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Izumo4IZUMO family member 4. (227 aa)    
Predicted Functional Partners:
Rps27a
Ribosomal protein S27A.
    
   0.845
Setd2
SET domain containing 2.
   
 0.809
Izumo3
IZUMO family member 3.
      
 0.794
MGP_SPRETEiJ_P0073376
annotation not available
   
 0.766
Setd1a
SET domain containing 1A.
   
 0.766
Ash1l
ASH1 like histone lysine methyltransferase.
    
 0.732
Izumo2
IZUMO family member 2.
      
 0.731
Izumo1
Izumo sperm-egg fusion 1.
      
 0.711
H3f3a
H3.3 histone A.
   
 0.706
H3f3b
H3.3 histone B.
   
 0.706
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.