STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plekhj1Pleckstrin homology domain containing, family J member 1. (164 aa)    
Predicted Functional Partners:
Fancm
Fanconi anemia, complementation group M.
    
 0.910
Pheta1
PH domain containing endocytic trafficking adaptor 1.
    
  
0.701
Ocrl
OCRL, inositol polyphosphate-5-phosphatase.
    
   0.618
Fanca
Fanconi anemia, complementation group A.
    
 0.613
Cenpt
Centromere protein T.
    
 0.584
H6pd
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
     
 0.547
Lin9
Lin-9 homolog (C. elegans).
    
 0.519
MGP_SPRETEiJ_P0025175
annotation not available
      
 0.511
Lin52
Lin-52 homolog (C. elegans).
    
 0.500
Gabra5
Gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5.
      
 0.497
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.