STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CactinCactin, spliceosome C complex subunit. (769 aa)    
Predicted Functional Partners:
Timm10
Translocase of inner mitochondrial membrane 10.
   
 0.937
Slu7
SLU7 splicing factor homolog (S. cerevisiae).
    
 0.892
Prkrip1
Prkr interacting protein 1 (IL11 inducible).
    
 0.881
Dhx8
DEAH (Asp-Glu-Ala-His) box polypeptide 8.
    
 0.874
Timm9
Translocase of inner mitochondrial membrane 9.
   
 0.869
MGP_SPRETEiJ_P0084725
annotation not available
   
 0.869
Cdc40
Cell division cycle 40.
    
 0.863
Sdhd
Succinate dehydrogenase complex, subunit D, integral membrane protein.
   
 0.829
Sde2
SDE2 telomere maintenance homolog (S. pombe).
    
 0.827
Fam32a
Family with sequence similarity 32, member A.
    
 0.827
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.