Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ahctf1 | MGP_SPRETEiJ_P0084463 | MGP_SPRETEiJ_P0022609 | MGP_SPRETEiJ_P0084463 | AT hook containing transcription factor 1. | annotation not available | 0.995 |
Ahctf1 | Nup107 | MGP_SPRETEiJ_P0022609 | MGP_SPRETEiJ_P0026095 | AT hook containing transcription factor 1. | Nucleoporin 107. | 0.998 |
Ahctf1 | Nup133 | MGP_SPRETEiJ_P0022609 | MGP_SPRETEiJ_P0090020 | AT hook containing transcription factor 1. | Nucleoporin 133. | 0.997 |
Ahctf1 | Nup160 | MGP_SPRETEiJ_P0022609 | MGP_SPRETEiJ_P0055010 | AT hook containing transcription factor 1. | Nucleoporin 160. | 0.996 |
Ahctf1 | Nup37 | MGP_SPRETEiJ_P0022609 | MGP_SPRETEiJ_P0025584 | AT hook containing transcription factor 1. | Nucleoporin 37. | 0.996 |
Ahctf1 | Nup43 | MGP_SPRETEiJ_P0022609 | MGP_SPRETEiJ_P0023309 | AT hook containing transcription factor 1. | Nucleoporin 43. | 0.996 |
Ahctf1 | Nup85 | MGP_SPRETEiJ_P0022609 | MGP_SPRETEiJ_P0032388 | AT hook containing transcription factor 1. | Nucleoporin 85. | 0.995 |
Ahctf1 | Ranbp2 | MGP_SPRETEiJ_P0022609 | MGP_SPRETEiJ_P0024076 | AT hook containing transcription factor 1. | RAN binding protein 2. | 0.961 |
Ahctf1 | Sec13 | MGP_SPRETEiJ_P0022609 | MGP_SPRETEiJ_P0078561 | AT hook containing transcription factor 1. | SEC13 homolog, nuclear pore and COPII coat complex component. | 0.995 |
Ahctf1 | Seh1l | MGP_SPRETEiJ_P0022609 | MGP_SPRETEiJ_P0048946 | AT hook containing transcription factor 1. | SEH1-like (S. cerevisiae. | 0.995 |
MGP_SPRETEiJ_P0084463 | Ahctf1 | MGP_SPRETEiJ_P0084463 | MGP_SPRETEiJ_P0022609 | annotation not available | AT hook containing transcription factor 1. | 0.995 |
MGP_SPRETEiJ_P0084463 | Nup107 | MGP_SPRETEiJ_P0084463 | MGP_SPRETEiJ_P0026095 | annotation not available | Nucleoporin 107. | 0.999 |
MGP_SPRETEiJ_P0084463 | Nup133 | MGP_SPRETEiJ_P0084463 | MGP_SPRETEiJ_P0090020 | annotation not available | Nucleoporin 133. | 0.999 |
MGP_SPRETEiJ_P0084463 | Nup160 | MGP_SPRETEiJ_P0084463 | MGP_SPRETEiJ_P0055010 | annotation not available | Nucleoporin 160. | 0.999 |
MGP_SPRETEiJ_P0084463 | Nup37 | MGP_SPRETEiJ_P0084463 | MGP_SPRETEiJ_P0025584 | annotation not available | Nucleoporin 37. | 0.999 |
MGP_SPRETEiJ_P0084463 | Nup43 | MGP_SPRETEiJ_P0084463 | MGP_SPRETEiJ_P0023309 | annotation not available | Nucleoporin 43. | 0.999 |
MGP_SPRETEiJ_P0084463 | Nup85 | MGP_SPRETEiJ_P0084463 | MGP_SPRETEiJ_P0032388 | annotation not available | Nucleoporin 85. | 0.999 |
MGP_SPRETEiJ_P0084463 | Ranbp2 | MGP_SPRETEiJ_P0084463 | MGP_SPRETEiJ_P0024076 | annotation not available | RAN binding protein 2. | 0.999 |
MGP_SPRETEiJ_P0084463 | Sec13 | MGP_SPRETEiJ_P0084463 | MGP_SPRETEiJ_P0078561 | annotation not available | SEC13 homolog, nuclear pore and COPII coat complex component. | 0.999 |
MGP_SPRETEiJ_P0084463 | Seh1l | MGP_SPRETEiJ_P0084463 | MGP_SPRETEiJ_P0048946 | annotation not available | SEH1-like (S. cerevisiae. | 0.999 |
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