STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AvilAdvillin. (819 aa)    
Predicted Functional Partners:
Cog8
Component of oligomeric golgi complex 8.
    
 0.735
Cog6
Component of oligomeric golgi complex 6.
    
 0.731
Cog3
Component of oligomeric golgi complex 3.
    
 0.728
Cask
Calcium/calmodulin-dependent serine protein kinase (MAGUK family).
   
  0.616
Smim7
Small integral membrane protein 7.
    
 0.577
Cog4
Component of oligomeric golgi complex 4.
    
 0.577
MGP_SPRETEiJ_P0051876
annotation not available
     
 0.530
Myo3b
Myosin IIIB.
     
 0.530
Actr3
ARP3 actin-related protein 3.
    
 
 0.526
Scn10a
Sodium channel, voltage-gated, type X, alpha.
      
 0.519
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.