Apof protein (Mus spretus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

Apof

Apolipoprotein F. (326 aa)

Predicted Functional Partners:

Cfhr1

0.880

Apoa2

0.842

Apoh

0.812

Apoc4

0.807

Apom

0.798

Apob

0.773

Pon1

0.768

Clu

0.748

Pltp

0.748

MGP_SPRETEiJ_P0091283

0.691

Your Current Organism:

Mus spretus

NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Apoa2	Apob	MGP_SPRETEiJ_P0022200	MGP_SPRETEiJ_P0033329	Apolipoprotein A-II.	Apolipoprotein B.	0.996
Apoa2	Apoc4	MGP_SPRETEiJ_P0022200	MGP_SPRETEiJ_P0081117	Apolipoprotein A-II.	Apolipoprotein C-IV.	0.978
Apoa2	Apof	MGP_SPRETEiJ_P0022200	MGP_SPRETEiJ_P0026418	Apolipoprotein A-II.	Apolipoprotein F.	0.842
Apoa2	Apoh	MGP_SPRETEiJ_P0022200	MGP_SPRETEiJ_P0032102	Apolipoprotein A-II.	Apolipoprotein H.	0.995
Apoa2	Apom	MGP_SPRETEiJ_P0022200	MGP_SPRETEiJ_P0046352	Apolipoprotein A-II.	Apolipoprotein M.	0.979
Apoa2	Clu	MGP_SPRETEiJ_P0022200	MGP_SPRETEiJ_P0038891	Apolipoprotein A-II.	Clusterin.	0.977
Apoa2	MGP_SPRETEiJ_P0091283	MGP_SPRETEiJ_P0022200	MGP_SPRETEiJ_P0091283	Apolipoprotein A-II.	annotation not available	0.998
Apoa2	Pltp	MGP_SPRETEiJ_P0022200	MGP_SPRETEiJ_P0058292	Apolipoprotein A-II.	Phospholipid transfer protein.	0.971
Apoa2	Pon1	MGP_SPRETEiJ_P0022200	MGP_SPRETEiJ_P0075335	Apolipoprotein A-II.	Paraoxonase 1.	0.982
Apob	Apoa2	MGP_SPRETEiJ_P0033329	MGP_SPRETEiJ_P0022200	Apolipoprotein B.	Apolipoprotein A-II.	0.996
Apob	Apoc4	MGP_SPRETEiJ_P0033329	MGP_SPRETEiJ_P0081117	Apolipoprotein B.	Apolipoprotein C-IV.	0.940
Apob	Apof	MGP_SPRETEiJ_P0033329	MGP_SPRETEiJ_P0026418	Apolipoprotein B.	Apolipoprotein F.	0.773
Apob	Apoh	MGP_SPRETEiJ_P0033329	MGP_SPRETEiJ_P0032102	Apolipoprotein B.	Apolipoprotein H.	0.988
Apob	Apom	MGP_SPRETEiJ_P0033329	MGP_SPRETEiJ_P0046352	Apolipoprotein B.	Apolipoprotein M.	0.960
Apob	Clu	MGP_SPRETEiJ_P0033329	MGP_SPRETEiJ_P0038891	Apolipoprotein B.	Clusterin.	0.949
Apob	MGP_SPRETEiJ_P0091283	MGP_SPRETEiJ_P0033329	MGP_SPRETEiJ_P0091283	Apolipoprotein B.	annotation not available	0.996
Apob	Pltp	MGP_SPRETEiJ_P0033329	MGP_SPRETEiJ_P0058292	Apolipoprotein B.	Phospholipid transfer protein.	0.968
Apob	Pon1	MGP_SPRETEiJ_P0033329	MGP_SPRETEiJ_P0075335	Apolipoprotein B.	Paraoxonase 1.	0.966
Apoc4	Apoa2	MGP_SPRETEiJ_P0081117	MGP_SPRETEiJ_P0022200	Apolipoprotein C-IV.	Apolipoprotein A-II.	0.978
Apoc4	Apob	MGP_SPRETEiJ_P0081117	MGP_SPRETEiJ_P0033329	Apolipoprotein C-IV.	Apolipoprotein B.	0.940