Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Egf | Egfr | MGP_SPRETEiJ_P0062875 | MGP_SPRETEiJ_P0027080 | Epidermal growth factor. | Epidermal growth factor receptor. | 0.999 |
Egf | Erbb2 | MGP_SPRETEiJ_P0062875 | MGP_SPRETEiJ_P0031076 | Epidermal growth factor. | Erb-b2 receptor tyrosine kinase 2. | 0.999 |
Egf | Erbb3 | MGP_SPRETEiJ_P0062875 | MGP_SPRETEiJ_P0026468 | Epidermal growth factor. | Erb-b2 receptor tyrosine kinase 3. | 0.999 |
Egf | Erbb4 | MGP_SPRETEiJ_P0062875 | MGP_SPRETEiJ_P0019152 | Epidermal growth factor. | Erb-b2 receptor tyrosine kinase 4. | 0.999 |
Egf | Grb2 | MGP_SPRETEiJ_P0062875 | MGP_SPRETEiJ_P0032430 | Epidermal growth factor. | Growth factor receptor bound protein 2. | 0.933 |
Egf | Nrg1 | MGP_SPRETEiJ_P0062875 | MGP_SPRETEiJ_P0087608 | Epidermal growth factor. | Neuregulin 1. | 0.858 |
Egf | Nrg2 | MGP_SPRETEiJ_P0062875 | MGP_SPRETEiJ_P0048300 | Epidermal growth factor. | Neuregulin 2. | 0.671 |
Egf | Pik3r1 | MGP_SPRETEiJ_P0062875 | MGP_SPRETEiJ_P0037000 | Epidermal growth factor. | Phosphoinositide-3-kinase regulatory subunit 1. | 0.854 |
Egf | Shc1 | MGP_SPRETEiJ_P0062875 | MGP_SPRETEiJ_P0061035 | Epidermal growth factor. | Src homology 2 domain-containing transforming protein C1. | 0.824 |
Egf | Tgfa | MGP_SPRETEiJ_P0062875 | MGP_SPRETEiJ_P0077688 | Epidermal growth factor. | Transforming growth factor alpha. | 0.990 |
Egfr | Egf | MGP_SPRETEiJ_P0027080 | MGP_SPRETEiJ_P0062875 | Epidermal growth factor receptor. | Epidermal growth factor. | 0.999 |
Egfr | Erbb2 | MGP_SPRETEiJ_P0027080 | MGP_SPRETEiJ_P0031076 | Epidermal growth factor receptor. | Erb-b2 receptor tyrosine kinase 2. | 0.999 |
Egfr | Erbb3 | MGP_SPRETEiJ_P0027080 | MGP_SPRETEiJ_P0026468 | Epidermal growth factor receptor. | Erb-b2 receptor tyrosine kinase 3. | 0.998 |
Egfr | Erbb4 | MGP_SPRETEiJ_P0027080 | MGP_SPRETEiJ_P0019152 | Epidermal growth factor receptor. | Erb-b2 receptor tyrosine kinase 4. | 0.981 |
Egfr | Grb2 | MGP_SPRETEiJ_P0027080 | MGP_SPRETEiJ_P0032430 | Epidermal growth factor receptor. | Growth factor receptor bound protein 2. | 0.999 |
Egfr | Nrg1 | MGP_SPRETEiJ_P0027080 | MGP_SPRETEiJ_P0087608 | Epidermal growth factor receptor. | Neuregulin 1. | 0.999 |
Egfr | Nrg2 | MGP_SPRETEiJ_P0027080 | MGP_SPRETEiJ_P0048300 | Epidermal growth factor receptor. | Neuregulin 2. | 0.993 |
Egfr | Pik3r1 | MGP_SPRETEiJ_P0027080 | MGP_SPRETEiJ_P0037000 | Epidermal growth factor receptor. | Phosphoinositide-3-kinase regulatory subunit 1. | 0.994 |
Egfr | Shc1 | MGP_SPRETEiJ_P0027080 | MGP_SPRETEiJ_P0061035 | Epidermal growth factor receptor. | Src homology 2 domain-containing transforming protein C1. | 0.999 |
Egfr | Tgfa | MGP_SPRETEiJ_P0027080 | MGP_SPRETEiJ_P0077688 | Epidermal growth factor receptor. | Transforming growth factor alpha. | 0.999 |
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