Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atg12 | Atg14 | MGP_SPRETEiJ_P0048615 | MGP_SPRETEiJ_P0038089 | Autophagy related 12. | Autophagy related 14. | 0.913 |
Atg12 | Atg3 | MGP_SPRETEiJ_P0048615 | MGP_SPRETEiJ_P0043623 | Autophagy related 12. | Autophagy related 3. | 0.999 |
Atg12 | Atg4b | MGP_SPRETEiJ_P0048615 | MGP_SPRETEiJ_P0020279 | Autophagy related 12. | Autophagy related 4B, cysteine peptidase. | 0.796 |
Atg12 | Atg5 | MGP_SPRETEiJ_P0048615 | MGP_SPRETEiJ_P0023959 | Autophagy related 12. | Autophagy related 5. | 0.999 |
Atg12 | Atg7 | MGP_SPRETEiJ_P0048615 | MGP_SPRETEiJ_P0078588 | Autophagy related 12. | Autophagy related 7. | 0.999 |
Atg12 | Fundc1 | MGP_SPRETEiJ_P0048615 | MGP_SPRETEiJ_P0094819 | Autophagy related 12. | FUN14 domain containing 1. | 0.723 |
Atg12 | MGP_SPRETEiJ_P0026675 | MGP_SPRETEiJ_P0048615 | MGP_SPRETEiJ_P0026675 | Autophagy related 12. | annotation not available | 0.936 |
Atg12 | Nbr1 | MGP_SPRETEiJ_P0048615 | MGP_SPRETEiJ_P0031517 | Autophagy related 12. | NBR1, autophagy cargo receptor. | 0.889 |
Atg12 | Sqstm1 | MGP_SPRETEiJ_P0048615 | MGP_SPRETEiJ_P0027790 | Autophagy related 12. | Sequestosome 1. | 0.946 |
Atg14 | Atg12 | MGP_SPRETEiJ_P0038089 | MGP_SPRETEiJ_P0048615 | Autophagy related 14. | Autophagy related 12. | 0.913 |
Atg14 | Atg3 | MGP_SPRETEiJ_P0038089 | MGP_SPRETEiJ_P0043623 | Autophagy related 14. | Autophagy related 3. | 0.710 |
Atg14 | Atg4b | MGP_SPRETEiJ_P0038089 | MGP_SPRETEiJ_P0020279 | Autophagy related 14. | Autophagy related 4B, cysteine peptidase. | 0.615 |
Atg14 | Atg5 | MGP_SPRETEiJ_P0038089 | MGP_SPRETEiJ_P0023959 | Autophagy related 14. | Autophagy related 5. | 0.926 |
Atg14 | Atg7 | MGP_SPRETEiJ_P0038089 | MGP_SPRETEiJ_P0078588 | Autophagy related 14. | Autophagy related 7. | 0.785 |
Atg14 | Fundc1 | MGP_SPRETEiJ_P0038089 | MGP_SPRETEiJ_P0094819 | Autophagy related 14. | FUN14 domain containing 1. | 0.428 |
Atg14 | MGP_SPRETEiJ_P0026675 | MGP_SPRETEiJ_P0038089 | MGP_SPRETEiJ_P0026675 | Autophagy related 14. | annotation not available | 0.912 |
Atg14 | Nbr1 | MGP_SPRETEiJ_P0038089 | MGP_SPRETEiJ_P0031517 | Autophagy related 14. | NBR1, autophagy cargo receptor. | 0.540 |
Atg14 | Sqstm1 | MGP_SPRETEiJ_P0038089 | MGP_SPRETEiJ_P0027790 | Autophagy related 14. | Sequestosome 1. | 0.701 |
Atg3 | Atg12 | MGP_SPRETEiJ_P0043623 | MGP_SPRETEiJ_P0048615 | Autophagy related 3. | Autophagy related 12. | 0.999 |
Atg3 | Atg14 | MGP_SPRETEiJ_P0043623 | MGP_SPRETEiJ_P0038089 | Autophagy related 3. | Autophagy related 14. | 0.710 |
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