Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Fibcd1 | Wfikkn2 | MGP_SPRETEiJ_P0053037 | MGP_SPRETEiJ_P0030647 | Fibrinogen C domain containing 1. | WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2. | 0.443 |
Fst | Fstl3 | MGP_SPRETEiJ_P0037199 | MGP_SPRETEiJ_P0024893 | Follistatin. | Follistatin-like 3. | 0.573 |
Fst | Gdf11 | MGP_SPRETEiJ_P0037199 | MGP_SPRETEiJ_P0026501 | Follistatin. | Growth differentiation factor 11. | 0.953 |
Fst | Mstn | MGP_SPRETEiJ_P0037199 | MGP_SPRETEiJ_P0018601 | Follistatin. | Myostatin. | 0.982 |
Fst | Wfikkn2 | MGP_SPRETEiJ_P0037199 | MGP_SPRETEiJ_P0030647 | Follistatin. | WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2. | 0.531 |
Fstl3 | Fst | MGP_SPRETEiJ_P0024893 | MGP_SPRETEiJ_P0037199 | Follistatin-like 3. | Follistatin. | 0.573 |
Fstl3 | Gdf11 | MGP_SPRETEiJ_P0024893 | MGP_SPRETEiJ_P0026501 | Follistatin-like 3. | Growth differentiation factor 11. | 0.923 |
Fstl3 | Mstn | MGP_SPRETEiJ_P0024893 | MGP_SPRETEiJ_P0018601 | Follistatin-like 3. | Myostatin. | 0.980 |
Fstl3 | Wfikkn2 | MGP_SPRETEiJ_P0024893 | MGP_SPRETEiJ_P0030647 | Follistatin-like 3. | WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2. | 0.569 |
Gdf11 | Fst | MGP_SPRETEiJ_P0026501 | MGP_SPRETEiJ_P0037199 | Growth differentiation factor 11. | Follistatin. | 0.953 |
Gdf11 | Fstl3 | MGP_SPRETEiJ_P0026501 | MGP_SPRETEiJ_P0024893 | Growth differentiation factor 11. | Follistatin-like 3. | 0.923 |
Gdf11 | Wap | MGP_SPRETEiJ_P0026501 | MGP_SPRETEiJ_P0026981 | Growth differentiation factor 11. | Whey acidic protein. | 0.435 |
Gdf11 | Wfikkn2 | MGP_SPRETEiJ_P0026501 | MGP_SPRETEiJ_P0030647 | Growth differentiation factor 11. | WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2. | 0.706 |
Igsf11 | Ildr1 | MGP_SPRETEiJ_P0043494 | MGP_SPRETEiJ_P0043357 | Immunoglobulin superfamily, member 11. | Immunoglobulin-like domain containing receptor 1. | 0.435 |
Igsf11 | Wfikkn2 | MGP_SPRETEiJ_P0043494 | MGP_SPRETEiJ_P0030647 | Immunoglobulin superfamily, member 11. | WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2. | 0.508 |
Ildr1 | Igsf11 | MGP_SPRETEiJ_P0043357 | MGP_SPRETEiJ_P0043494 | Immunoglobulin-like domain containing receptor 1. | Immunoglobulin superfamily, member 11. | 0.435 |
Ildr1 | Lrit1 | MGP_SPRETEiJ_P0043357 | MGP_SPRETEiJ_P0037975 | Immunoglobulin-like domain containing receptor 1. | Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1. | 0.663 |
Ildr1 | Lrit3 | MGP_SPRETEiJ_P0043357 | MGP_SPRETEiJ_P0062883 | Immunoglobulin-like domain containing receptor 1. | Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3. | 0.707 |
Ildr1 | Wfikkn2 | MGP_SPRETEiJ_P0043357 | MGP_SPRETEiJ_P0030647 | Immunoglobulin-like domain containing receptor 1. | WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2. | 0.500 |
Lrit1 | Ildr1 | MGP_SPRETEiJ_P0037975 | MGP_SPRETEiJ_P0043357 | Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1. | Immunoglobulin-like domain containing receptor 1. | 0.663 |
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