STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbxl20F-box and leucine-rich repeat protein 20. (436 aa)    
Predicted Functional Partners:
Skp1a
S-phase kinase-associated protein 1A.
    
 0.959
Cul1
Cullin 1.
    
 0.895
Ptar1
Protein prenyltransferase alpha subunit repeat containing 1.
    
 
 0.732
Cul3
Cullin 3.
    
 0.711
MGP_SPRETEiJ_P0017897
annotation not available
    
 
 0.698
Rabggtb
Rab geranylgeranyl transferase, b subunit.
    
 
 0.683
Itpr3
Inositol 1,4,5-triphosphate receptor 3.
   
 
 0.679
Rbx1
Ring-box 1.
     
 0.630
Nedd8
Neural precursor cell expressed, developmentally down-regulated gene 8.
    
 0.628
Fbxo3
F-box protein 3.
    
 
 0.600
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.