STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Casc3Cancer susceptibility candidate 3. (698 aa)    
Predicted Functional Partners:
Eif4a3
Eukaryotic translation initiation factor 4A3.
    
 0.999
Magoh
Mago homolog, exon junction complex core component.
    
 0.999
Magohb
Mago homolog B, exon junction complex core component.
    
 0.999
Upf1
UPF1 regulator of nonsense transcripts homolog (yeast).
    
 0.997
Upf3a
UPF3 regulator of nonsense transcripts homolog A (yeast).
    
 0.994
Upf3b
UPF3 regulator of nonsense transcripts homolog B (yeast).
    
 0.992
MGP_SPRETEiJ_P0022528
annotation not available
   
 0.987
Rbm8a
RNA binding motif protein 8a.
   
 0.987
Upf2
UPF2 regulator of nonsense transcripts homolog (yeast).
    
 0.983
MGP_SPRETEiJ_P0096311
annotation not available
   
 0.970
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.