STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krt42Keratin 42. (452 aa)    
Predicted Functional Partners:
Unc79
Unc-79 homolog.
    
 0.798
MGP_SPRETEiJ_P0023847
annotation not available
    
  0.714
Ranbp2
RAN binding protein 2.
    
 0.609
MGP_SPRETEiJ_P0031246
annotation not available
  
 
 
0.602
Krt5
Keratin 5.
   
0.581
Kdm6a
Lysine (K)-specific demethylase 6A.
    
 0.546
Leo1
Leo1, Paf1/RNA polymerase II complex component.
    
  0.526
Ttc41
Tetratricopeptide repeat domain 41.
    
 0.510
Tep1
Telomerase associated protein 1.
    
 0.510
Rims2
Regulating synaptic membrane exocytosis 2.
    
  0.496
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.