STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gm27029Predicted gene, 27029. (543 aa)    
Predicted Functional Partners:
Ttc41
Tetratricopeptide repeat domain 41.
    
 0.910
Tep1
Telomerase associated protein 1.
    
 0.910
Ppp5c
Protein phosphatase 5, catalytic subunit.
    
 0.905
Bag3
BCL2-associated athanogene 3.
    
  0.904
Aars2
alanyl-tRNA synthetase 2, mitochondrial.
   
 
0.892
Gm11983
Predicted gene 11983.
   
 0.890
Trap1
TNF receptor-associated protein 1.
   
 0.890
Hsp90ab1
Heat shock protein 90 alpha (cytosolic), class B member 1.
   
 0.890
Tsc1
TSC complex subunit 1.
   
 0.890
Ptges2
Prostaglandin E synthase 2.
     
 0.876
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.