STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rdh11Retinol dehydrogenase 11. (316 aa)    
Predicted Functional Partners:
Rdh10
Retinol dehydrogenase 10 (all-trans).
   
 
0.968
Rlbp1
Retinaldehyde binding protein 1.
     
 0.945
Rdh5
Retinol dehydrogenase 5.
   
 
0.936
Aldh1a3
Aldehyde dehydrogenase family 1, subfamily A3.
  
 0.931
Rbp2
Retinol binding protein 2, cellular.
     
 0.912
Bco1
Beta-carotene oxygenase 1.
     
 0.907
Cyp26a1
Cytochrome P450, family 26, subfamily a, polypeptide 1.
   
 
 0.906
Rdh8
Retinol dehydrogenase 8.
  
 
 0.901
Aldh1a2
Aldehyde dehydrogenase family 1, subfamily A2.
  
 0.891
MGP_SPRETEiJ_P0050365
annotation not available
  
 0.888
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.