STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asb13Ankyrin repeat and SOCS box-containing 13. (278 aa)    
Predicted Functional Partners:
Eloc
Elongin C.
    
 0.839
Asb7
Ankyrin repeat and SOCS box-containing 7.
  
 
0.750
Cul5
Cullin 5.
    
 0.748
Nedd8
Neural precursor cell expressed, developmentally down-regulated gene 8.
    
  0.670
Commd8
COMM domain containing 8.
    
  0.670
Elobl
Elongin B-like.
    
 0.652
Elob
Elongin B.
    
 0.652
Commd4
COMM domain containing 4.
    
  0.643
MGP_SPRETEiJ_P0027184
annotation not available
    
  0.640
MGP_SPRETEiJ_P0027188
annotation not available
    
  0.640
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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