STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Yae1d1Yae1 domain containing 1. (216 aa)    
Predicted Functional Partners:
LTO1
ABCE maturation factor.
   
 0.984
Abce1
ATP-binding cassette, sub-family E (OABP), member 1.
    
 
 0.894
Mms19
MMS19 cytosolic iron-sulfur assembly component.
     
 0.737
Ciapin1
Cytokine induced apoptosis inhibitor 1.
     
 0.714
MGP_SPRETEiJ_P0052094
annotation not available
     
 0.679
Ciao1
Cytosolic iron-sulfur protein assembly 1.
    
 0.608
Zc3h4
Zinc finger CCCH-type containing 4.
      
 0.517
Ncoa5
Nuclear receptor coactivator 5.
      
 0.508
MGP_SPRETEiJ_P0031206
annotation not available
      
 0.501
Dido1
Death inducer-obliterator 1.
      
 0.497
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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