Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Nt5c2 | Pom121l2 | MGP_SPRETEiJ_P0051070 | MGP_SPRETEiJ_P0035397 | 5'-nucleotidase, cytosolic II. | POM121 membrane glycoprotein-like 2 (rat). | 0.402 |
Pom121l2 | Nt5c2 | MGP_SPRETEiJ_P0035397 | MGP_SPRETEiJ_P0051070 | POM121 membrane glycoprotein-like 2 (rat). | 5'-nucleotidase, cytosolic II. | 0.402 |
Pom121l2 | Slc8a3 | MGP_SPRETEiJ_P0035397 | MGP_SPRETEiJ_P0034196 | POM121 membrane glycoprotein-like 2 (rat). | Solute carrier family 8 (sodium/calcium exchanger), member 3. | 0.461 |
Pom121l2 | Tm6sf1 | MGP_SPRETEiJ_P0035397 | MGP_SPRETEiJ_P0083845 | POM121 membrane glycoprotein-like 2 (rat). | Transmembrane 6 superfamily member 1. | 0.444 |
Slc8a3 | Pom121l2 | MGP_SPRETEiJ_P0034196 | MGP_SPRETEiJ_P0035397 | Solute carrier family 8 (sodium/calcium exchanger), member 3. | POM121 membrane glycoprotein-like 2 (rat). | 0.461 |
Tm6sf1 | Pom121l2 | MGP_SPRETEiJ_P0083845 | MGP_SPRETEiJ_P0035397 | Transmembrane 6 superfamily member 1. | POM121 membrane glycoprotein-like 2 (rat). | 0.444 |