STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGP_SPRETEiJ_P0035538annotation not available (368 aa)    
Predicted Functional Partners:
Dnaaf4
Dynein axonemal assembly factor 4.
      
 0.801
D130043K22Rik
RIKEN cDNA D130043K22 gene.
    
 
 0.786
Pot1a
Protection of telomeres 1A.
    
 0.745
MGP_SPRETEiJ_P0033774
annotation not available
      
 0.636
Tdp2
tyrosyl-DNA phosphodiesterase 2.
      
 0.613
Acot13
acyl-CoA thioesterase 13.
      
 0.564
Pcnt
Pericentrin (kendrin).
      
 0.559
Robo1
Roundabout guidance receptor 1.
      
 0.552
AU040320
Expressed sequence AU040320.
    
 
 0.551
Atp2c2
ATPase, Ca++ transporting, type 2C, member 2.
      
 0.520
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.