STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mterf3Mitochondrial transcription termination factor 3. (412 aa)    
Predicted Functional Partners:
Fastkd2
FAST kinase domains 2.
   
 
 0.845
Ddx28
DEAD (Asp-Glu-Ala-Asp) box polypeptide 28.
    
 
 0.770
Mrpl20
Mitochondrial ribosomal protein L20.
    
 
 0.709
Ptcd1
Pentatricopeptide repeat domain 1.
    
 
 0.693
Mrm3
Mitochondrial rRNA methyltransferase 3.
    
 
 0.659
Rpusd4
RNA pseudouridylate synthase domain containing 4.
   
 
 0.648
Mrpl36
Mitochondrial ribosomal protein L36.
    
 
 0.631
Mterf2
Mitochondrial transcription termination factor 2.
   
  
 0.615
Polrmt
Polymerase (RNA) mitochondrial (DNA directed).
      
 0.614
Tfb1m
Transcription factor B1, mitochondrial.
   
  
 0.613
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.