Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B4galnt1 | Hexa | MGP_SPRETEiJ_P0026253 | MGP_SPRETEiJ_P0091765 | beta-1,4-N-acetyl-galactosaminyl transferase 1. | Hexosaminidase A. | 0.954 |
B4galnt1 | Hexb | MGP_SPRETEiJ_P0026253 | MGP_SPRETEiJ_P0036900 | beta-1,4-N-acetyl-galactosaminyl transferase 1. | Hexosaminidase B. | 0.949 |
B4galnt1 | St3gal5 | MGP_SPRETEiJ_P0026253 | MGP_SPRETEiJ_P0077175 | beta-1,4-N-acetyl-galactosaminyl transferase 1. | ST3 beta-galactoside alpha-2,3-sialyltransferase 5. | 0.967 |
B4galnt1 | St8sia1 | MGP_SPRETEiJ_P0026253 | MGP_SPRETEiJ_P0080005 | beta-1,4-N-acetyl-galactosaminyl transferase 1. | ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1. | 0.963 |
Gla | Hexa | MGP_SPRETEiJ_P0096441 | MGP_SPRETEiJ_P0091765 | Galactosidase, alpha. | Hexosaminidase A. | 0.963 |
Gla | Hexb | MGP_SPRETEiJ_P0096441 | MGP_SPRETEiJ_P0036900 | Galactosidase, alpha. | Hexosaminidase B. | 0.907 |
Gm2a | Hexa | MGP_SPRETEiJ_P0028128 | MGP_SPRETEiJ_P0091765 | GM2 ganglioside activator protein. | Hexosaminidase A. | 0.953 |
Gm2a | Hexb | MGP_SPRETEiJ_P0028128 | MGP_SPRETEiJ_P0036900 | GM2 ganglioside activator protein. | Hexosaminidase B. | 0.967 |
Gns | Hexa | MGP_SPRETEiJ_P0026166 | MGP_SPRETEiJ_P0091765 | Glucosamine (N-acetyl)-6-sulfatase. | Hexosaminidase A. | 0.951 |
Gns | Hexb | MGP_SPRETEiJ_P0026166 | MGP_SPRETEiJ_P0036900 | Glucosamine (N-acetyl)-6-sulfatase. | Hexosaminidase B. | 0.876 |
Hexa | B4galnt1 | MGP_SPRETEiJ_P0091765 | MGP_SPRETEiJ_P0026253 | Hexosaminidase A. | beta-1,4-N-acetyl-galactosaminyl transferase 1. | 0.954 |
Hexa | Gla | MGP_SPRETEiJ_P0091765 | MGP_SPRETEiJ_P0096441 | Hexosaminidase A. | Galactosidase, alpha. | 0.963 |
Hexa | Gm2a | MGP_SPRETEiJ_P0091765 | MGP_SPRETEiJ_P0028128 | Hexosaminidase A. | GM2 ganglioside activator protein. | 0.953 |
Hexa | Gns | MGP_SPRETEiJ_P0091765 | MGP_SPRETEiJ_P0026166 | Hexosaminidase A. | Glucosamine (N-acetyl)-6-sulfatase. | 0.951 |
Hexa | Hexb | MGP_SPRETEiJ_P0091765 | MGP_SPRETEiJ_P0036900 | Hexosaminidase A. | Hexosaminidase B. | 0.995 |
Hexa | Hexdc | MGP_SPRETEiJ_P0091765 | MGP_SPRETEiJ_P0033183 | Hexosaminidase A. | Hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing. | 0.955 |
Hexa | Naga | MGP_SPRETEiJ_P0091765 | MGP_SPRETEiJ_P0041001 | Hexosaminidase A. | N-acetyl galactosaminidase, alpha. | 0.969 |
Hexa | Nagk | MGP_SPRETEiJ_P0091765 | MGP_SPRETEiJ_P0077525 | Hexosaminidase A. | N-acetylglucosamine kinase. | 0.944 |
Hexa | St3gal5 | MGP_SPRETEiJ_P0091765 | MGP_SPRETEiJ_P0077175 | Hexosaminidase A. | ST3 beta-galactoside alpha-2,3-sialyltransferase 5. | 0.944 |
Hexa | St8sia1 | MGP_SPRETEiJ_P0091765 | MGP_SPRETEiJ_P0080005 | Hexosaminidase A. | ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1. | 0.945 |
page 1 of 3