STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ankra2Ankyrin repeat, family A (RFXANK-like), 2. (312 aa)    
Predicted Functional Partners:
MGP_SPRETEiJ_P0080923
annotation not available
    
 0.990
Hdac4
Histone deacetylase 4.
    
 0.965
Lrp2
Low density lipoprotein receptor-related protein 2.
    
 
 0.954
Hdac5
Histone deacetylase 5.
    
 0.897
Cul7
Cullin 7.
    
  0.890
Rfx7
Regulatory factor X, 7.
    
 
 0.890
Fbxw8
F-box and WD-40 domain protein 8.
    
  0.887
MGP_SPRETEiJ_P0059961
annotation not available
    
 0.838
Obsl1
Obscurin-like 1.
    
 0.794
Lrp4
Low density lipoprotein receptor-related protein 4.
    
 
 0.771
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.