STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
4930452B06RikRIKEN cDNA 4930452B06 gene. (673 aa)    
Predicted Functional Partners:
Efhb
EF hand domain family, member B.
    
   0.819
Pacrg
PARK2 co-regulated.
    
 
 0.717
5730480H06Rik
RIKEN cDNA 5730480H06 gene.
    
 
 0.717
Efhc1
EF-hand domain (C-terminal) containing 1.
    
 
 0.694
Efhc2
EF-hand domain (C-terminal) containing 2.
    
 
 0.694
MGP_SPRETEiJ_P0022169
annotation not available
    
   0.623
1700028P14Rik
RIKEN cDNA 1700028P14 gene.
    
   0.623
1700013F07Rik
RIKEN cDNA 1700013F07 gene.
    
   0.623
Spag8
Sperm associated antigen 8.
    
   0.623
1700012P22Rik
RIKEN cDNA 1700012P22 gene.
    
   0.623
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.