STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cnih1Cornichon family AMPA receptor auxiliary protein 1. (144 aa)    
Predicted Functional Partners:
Gria1
Glutamate receptor, ionotropic, AMPA1 (alpha 1).
    
 0.947
Gria2
Glutamate receptor, ionotropic, AMPA2 (alpha 2).
    
 0.891
Gria3
Glutamate receptor, ionotropic, AMPA3 (alpha 3).
    
 0.889
Gria4
Glutamate receptor, ionotropic, AMPA4 (alpha 4).
    
 0.873
MGP_SPRETEiJ_P0034411
annotation not available
   
 0.826
Tgfa
Transforming growth factor alpha.
     
 0.737
Prpf19
pre-mRNA processing factor 19.
 
   
  0.730
MGP_SPRETEiJ_P0080303
annotation not available
    
 0.725
Gorasp2
Golgi reassembly stacking protein 2.
   
 0.706
Gorasp1
Golgi reassembly stacking protein 1.
   
 0.703
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.