STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AjubaAjuba LIM protein. (547 aa)    
Predicted Functional Partners:
Lats1
Large tumor suppressor.
    
 0.979
MGP_SPRETEiJ_P0038699
annotation not available
    
 0.972
Sav1
Salvador family WW domain containing 1.
   
 0.959
Limd1
LIM domains containing 1.
    
 
0.939
Wtip
WT1-interacting protein.
    
 
0.938
Ncor1
Nuclear receptor co-repressor 1.
    
  0.907
Haus1
HAUS augmin-like complex, subunit 1.
    
 0.811
Haus3
HAUS augmin-like complex, subunit 3.
    
 0.807
Haus8
4HAUS augmin-like complex, subunit 8.
    
 0.749
Rbm42
RNA binding motif protein 42.
    
 0.668
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.