STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gm20521Predicted gene 20521. (333 aa)    
Predicted Functional Partners:
Acin1
Apoptotic chromatin condensation inducer 1.
   
 0.945
Papola
Poly (A) polymerase alpha.
   
 0.934
Eif4a3
Eukaryotic translation initiation factor 4A3.
   
 0.917
Papolb
Poly (A) polymerase beta (testis specific).
   
 0.915
Papolg
poly(A) polymerase gamma.
   
 0.909
Elavl1
ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R).
  
  
 0.908
Sap18
Sin3-associated polypeptide 18.
   
 0.904
Upf2
UPF2 regulator of nonsense transcripts homolog (yeast).
    
 0.886
Cstf2t
Cleavage stimulation factor, 3' pre-RNA subunit 2, tau.
    
0.885
Cstf2
Cleavage stimulation factor, 3' pre-RNA subunit 2.
    
0.885
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.