Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Fancm | MGP_SPRETEiJ_P0095866 | MGP_SPRETEiJ_P0033873 | MGP_SPRETEiJ_P0095866 | Fanconi anemia, complementation group M. | annotation not available | 0.885 |
Fancm | Nynrin | MGP_SPRETEiJ_P0033873 | MGP_SPRETEiJ_P0038632 | Fanconi anemia, complementation group M. | NYN domain and retroviral integrase containing. | 0.922 |
Fancm | Rev3l | MGP_SPRETEiJ_P0033873 | MGP_SPRETEiJ_P0023810 | Fanconi anemia, complementation group M. | REV3 like, DNA directed polymerase zeta catalytic subunit. | 0.981 |
Hdac1 | Hdac2 | MGP_SPRETEiJ_P0067128 | MGP_SPRETEiJ_P0023772 | Histone deacetylase 1. | Histone deacetylase 2. | 0.999 |
Hdac1 | Hdac3 | MGP_SPRETEiJ_P0067128 | MGP_SPRETEiJ_P0048450 | Histone deacetylase 1. | Histone deacetylase 3. | 0.859 |
Hdac1 | Hdac8 | MGP_SPRETEiJ_P0067128 | MGP_SPRETEiJ_P0096151 | Histone deacetylase 1. | Histone deacetylase 8. | 0.408 |
Hdac1 | MGP_SPRETEiJ_P0067103 | MGP_SPRETEiJ_P0067128 | MGP_SPRETEiJ_P0067103 | Histone deacetylase 1. | annotation not available | 0.999 |
Hdac1 | Nynrin | MGP_SPRETEiJ_P0067128 | MGP_SPRETEiJ_P0038632 | Histone deacetylase 1. | NYN domain and retroviral integrase containing. | 0.944 |
Hdac1 | Rbbp7 | MGP_SPRETEiJ_P0067128 | MGP_SPRETEiJ_P0097044 | Histone deacetylase 1. | Retinoblastoma binding protein 7, chromatin remodeling factor. | 0.999 |
Hdac1 | Wdr73 | MGP_SPRETEiJ_P0067128 | MGP_SPRETEiJ_P0083772 | Histone deacetylase 1. | WD repeat domain 73. | 0.847 |
Hdac2 | Hdac1 | MGP_SPRETEiJ_P0023772 | MGP_SPRETEiJ_P0067128 | Histone deacetylase 2. | Histone deacetylase 1. | 0.999 |
Hdac2 | Hdac3 | MGP_SPRETEiJ_P0023772 | MGP_SPRETEiJ_P0048450 | Histone deacetylase 2. | Histone deacetylase 3. | 0.852 |
Hdac2 | Hdac8 | MGP_SPRETEiJ_P0023772 | MGP_SPRETEiJ_P0096151 | Histone deacetylase 2. | Histone deacetylase 8. | 0.465 |
Hdac2 | MGP_SPRETEiJ_P0067103 | MGP_SPRETEiJ_P0023772 | MGP_SPRETEiJ_P0067103 | Histone deacetylase 2. | annotation not available | 0.999 |
Hdac2 | Nynrin | MGP_SPRETEiJ_P0023772 | MGP_SPRETEiJ_P0038632 | Histone deacetylase 2. | NYN domain and retroviral integrase containing. | 0.944 |
Hdac2 | Rbbp7 | MGP_SPRETEiJ_P0023772 | MGP_SPRETEiJ_P0097044 | Histone deacetylase 2. | Retinoblastoma binding protein 7, chromatin remodeling factor. | 0.999 |
Hdac2 | Wdr73 | MGP_SPRETEiJ_P0023772 | MGP_SPRETEiJ_P0083772 | Histone deacetylase 2. | WD repeat domain 73. | 0.847 |
Hdac3 | Hdac1 | MGP_SPRETEiJ_P0048450 | MGP_SPRETEiJ_P0067128 | Histone deacetylase 3. | Histone deacetylase 1. | 0.859 |
Hdac3 | Hdac2 | MGP_SPRETEiJ_P0048450 | MGP_SPRETEiJ_P0023772 | Histone deacetylase 3. | Histone deacetylase 2. | 0.852 |
Hdac3 | Hdac8 | MGP_SPRETEiJ_P0048450 | MGP_SPRETEiJ_P0096151 | Histone deacetylase 3. | Histone deacetylase 8. | 0.554 |
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