STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tdrd3Tudor domain containing 3. (743 aa)    
Predicted Functional Partners:
Fancm
Fanconi anemia, complementation group M.
    
 0.998
Top3b
Topoisomerase (DNA) III beta.
    
 0.996
Wrn
Werner syndrome RecQ like helicase.
    
 0.989
Top3a
Topoisomerase (DNA) III alpha.
    
 0.973
Rmi2
RecQ mediated genome instability 2.
    
 0.963
Rpa3
Replication protein A3.
    
 0.924
Smg6
Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans).
    
  0.902
Upf1
UPF1 regulator of nonsense transcripts homolog (yeast).
    
  0.901
Mus81
MUS81 structure-specific endonuclease subunit.
    
 0.897
Casc3
Cancer susceptibility candidate 3.
    
  0.885
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.