Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cebpb | Klf12 | MGP_SPRETEiJ_P0058517 | MGP_SPRETEiJ_P0039271 | CCAAT/enhancer binding protein (C/EBP), beta. | Kruppel-like factor 12. | 0.406 |
Cebpb | Nfkb1 | MGP_SPRETEiJ_P0058517 | MGP_SPRETEiJ_P0063081 | CCAAT/enhancer binding protein (C/EBP), beta. | Nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105. | 0.683 |
Cebpb | Rela | MGP_SPRETEiJ_P0058517 | MGP_SPRETEiJ_P0049607 | CCAAT/enhancer binding protein (C/EBP), beta. | V-rel reticuloendotheliosis viral oncogene homolog A (avian). | 0.811 |
Klf12 | Cebpb | MGP_SPRETEiJ_P0039271 | MGP_SPRETEiJ_P0058517 | Kruppel-like factor 12. | CCAAT/enhancer binding protein (C/EBP), beta. | 0.406 |
Klf12 | MGP_SPRETEiJ_P0023847 | MGP_SPRETEiJ_P0039271 | MGP_SPRETEiJ_P0023847 | Kruppel-like factor 12. | annotation not available | 0.639 |
Klf12 | Nfkb1 | MGP_SPRETEiJ_P0039271 | MGP_SPRETEiJ_P0063081 | Kruppel-like factor 12. | Nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105. | 0.410 |
Klf12 | Rela | MGP_SPRETEiJ_P0039271 | MGP_SPRETEiJ_P0049607 | Kruppel-like factor 12. | V-rel reticuloendotheliosis viral oncogene homolog A (avian). | 0.438 |
Klf12 | Rps27a | MGP_SPRETEiJ_P0039271 | MGP_SPRETEiJ_P0027332 | Kruppel-like factor 12. | Ribosomal protein S27A. | 0.463 |
MGP_SPRETEiJ_P0023847 | Klf12 | MGP_SPRETEiJ_P0023847 | MGP_SPRETEiJ_P0039271 | annotation not available | Kruppel-like factor 12. | 0.639 |
Nfkb1 | Cebpb | MGP_SPRETEiJ_P0063081 | MGP_SPRETEiJ_P0058517 | Nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105. | CCAAT/enhancer binding protein (C/EBP), beta. | 0.683 |
Nfkb1 | Klf12 | MGP_SPRETEiJ_P0063081 | MGP_SPRETEiJ_P0039271 | Nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105. | Kruppel-like factor 12. | 0.410 |
Nfkb1 | Rela | MGP_SPRETEiJ_P0063081 | MGP_SPRETEiJ_P0049607 | Nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105. | V-rel reticuloendotheliosis viral oncogene homolog A (avian). | 0.999 |
Nfkb1 | Rps27a | MGP_SPRETEiJ_P0063081 | MGP_SPRETEiJ_P0027332 | Nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105. | Ribosomal protein S27A. | 0.651 |
Rela | Cebpb | MGP_SPRETEiJ_P0049607 | MGP_SPRETEiJ_P0058517 | V-rel reticuloendotheliosis viral oncogene homolog A (avian). | CCAAT/enhancer binding protein (C/EBP), beta. | 0.811 |
Rela | Klf12 | MGP_SPRETEiJ_P0049607 | MGP_SPRETEiJ_P0039271 | V-rel reticuloendotheliosis viral oncogene homolog A (avian). | Kruppel-like factor 12. | 0.438 |
Rela | Nfkb1 | MGP_SPRETEiJ_P0049607 | MGP_SPRETEiJ_P0063081 | V-rel reticuloendotheliosis viral oncogene homolog A (avian). | Nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105. | 0.999 |
Rela | Rps27a | MGP_SPRETEiJ_P0049607 | MGP_SPRETEiJ_P0027332 | V-rel reticuloendotheliosis viral oncogene homolog A (avian). | Ribosomal protein S27A. | 0.756 |
Rps27a | Klf12 | MGP_SPRETEiJ_P0027332 | MGP_SPRETEiJ_P0039271 | Ribosomal protein S27A. | Kruppel-like factor 12. | 0.463 |
Rps27a | Nfkb1 | MGP_SPRETEiJ_P0027332 | MGP_SPRETEiJ_P0063081 | Ribosomal protein S27A. | Nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105. | 0.651 |
Rps27a | Rela | MGP_SPRETEiJ_P0027332 | MGP_SPRETEiJ_P0049607 | Ribosomal protein S27A. | V-rel reticuloendotheliosis viral oncogene homolog A (avian). | 0.756 |