Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Braf | Cbl | MGP_SPRETEiJ_P0076237 | MGP_SPRETEiJ_P0091098 | Braf transforming gene. | Casitas B-lineage lymphoma. | 0.428 |
Braf | Egf | MGP_SPRETEiJ_P0076237 | MGP_SPRETEiJ_P0062875 | Braf transforming gene. | Epidermal growth factor. | 0.591 |
Braf | Egfr | MGP_SPRETEiJ_P0076237 | MGP_SPRETEiJ_P0027080 | Braf transforming gene. | Epidermal growth factor receptor. | 0.669 |
Braf | Grb2 | MGP_SPRETEiJ_P0076237 | MGP_SPRETEiJ_P0032430 | Braf transforming gene. | Growth factor receptor bound protein 2. | 0.618 |
Braf | Ptpn11 | MGP_SPRETEiJ_P0076237 | MGP_SPRETEiJ_P0073085 | Braf transforming gene. | Protein tyrosine phosphatase, non-receptor type 11. | 0.608 |
Braf | Spry2 | MGP_SPRETEiJ_P0076237 | MGP_SPRETEiJ_P0039350 | Braf transforming gene. | Sprouty RTK signaling antagonist 2. | 0.978 |
Cbl | Braf | MGP_SPRETEiJ_P0091098 | MGP_SPRETEiJ_P0076237 | Casitas B-lineage lymphoma. | Braf transforming gene. | 0.428 |
Cbl | Cblc | MGP_SPRETEiJ_P0091098 | MGP_SPRETEiJ_P0081143 | Casitas B-lineage lymphoma. | Casitas B-lineage lymphoma c. | 0.919 |
Cbl | Egf | MGP_SPRETEiJ_P0091098 | MGP_SPRETEiJ_P0062875 | Casitas B-lineage lymphoma. | Epidermal growth factor. | 0.802 |
Cbl | Egfr | MGP_SPRETEiJ_P0091098 | MGP_SPRETEiJ_P0027080 | Casitas B-lineage lymphoma. | Epidermal growth factor receptor. | 0.999 |
Cbl | Grap | MGP_SPRETEiJ_P0091098 | MGP_SPRETEiJ_P0028522 | Casitas B-lineage lymphoma. | GRB2-related adaptor protein. | 0.883 |
Cbl | Grap2 | MGP_SPRETEiJ_P0091098 | MGP_SPRETEiJ_P0040851 | Casitas B-lineage lymphoma. | GRB2-related adaptor protein 2. | 0.940 |
Cbl | Grb2 | MGP_SPRETEiJ_P0091098 | MGP_SPRETEiJ_P0032430 | Casitas B-lineage lymphoma. | Growth factor receptor bound protein 2. | 0.999 |
Cbl | Ptpn11 | MGP_SPRETEiJ_P0091098 | MGP_SPRETEiJ_P0073085 | Casitas B-lineage lymphoma. | Protein tyrosine phosphatase, non-receptor type 11. | 0.939 |
Cbl | Spry1 | MGP_SPRETEiJ_P0091098 | MGP_SPRETEiJ_P0059713 | Casitas B-lineage lymphoma. | Sprouty RTK signaling antagonist 1. | 0.840 |
Cbl | Spry2 | MGP_SPRETEiJ_P0091098 | MGP_SPRETEiJ_P0039350 | Casitas B-lineage lymphoma. | Sprouty RTK signaling antagonist 2. | 0.999 |
Cblc | Cbl | MGP_SPRETEiJ_P0081143 | MGP_SPRETEiJ_P0091098 | Casitas B-lineage lymphoma c. | Casitas B-lineage lymphoma. | 0.919 |
Cblc | Egfr | MGP_SPRETEiJ_P0081143 | MGP_SPRETEiJ_P0027080 | Casitas B-lineage lymphoma c. | Epidermal growth factor receptor. | 0.980 |
Cblc | Grap | MGP_SPRETEiJ_P0081143 | MGP_SPRETEiJ_P0028522 | Casitas B-lineage lymphoma c. | GRB2-related adaptor protein. | 0.868 |
Cblc | Grap2 | MGP_SPRETEiJ_P0081143 | MGP_SPRETEiJ_P0040851 | Casitas B-lineage lymphoma c. | GRB2-related adaptor protein 2. | 0.868 |
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