STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Abcc4ATP-binding cassette, sub-family C (CFTR/MRP), member 4. (1325 aa)    
Predicted Functional Partners:
Abcg2
ATP binding cassette subfamily G member 2 (Junior blood group).
   
0.700
Slc22a7
Solute carrier family 22 (organic anion transporter), member 7.
    
 
 0.677
Abcg1
ATP binding cassette subfamily G member 1.
   
0.639
Slc22a6
Solute carrier family 22 (organic anion transporter), member 6.
    
 
 0.632
MGP_SPRETEiJ_P0049128
annotation not available
  
 0.626
Slco2b1
Solute carrier organic anion transporter family, member 2b1.
      
 0.613
Gopc
Golgi associated PDZ and coiled-coil motif containing.
    
 0.589
Usp10
Ubiquitin specific peptidase 10.
    
  0.589
Tjp1
Tight junction protein 1.
     
 0.581
Slc47a1
Solute carrier family 47, member 1.
  
  
 0.575
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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