STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hhla1HERV-H LTR-associating 1. (514 aa)    
Predicted Functional Partners:
Mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.603
Oc90
Otoconin 90.
      
 0.575
Arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.546
Arid4b
AT rich interactive domain 4B (RBP1-like).
    
 0.546
Acsbg2
acyl-CoA synthetase bubblegum family member 2.
    
 0.474
Bard1
BRCA1 associated RING domain 1.
   
 0.469
Leo1
Leo1, Paf1/RNA polymerase II complex component.
    
  0.455
Ptk7
PTK7 protein tyrosine kinase 7.
    
  0.441
Slf1
SMC5-SMC6 complex localization factor 1.
   
  0.439
Wdr90
WD repeat domain 90.
    
  0.429
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.