Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Aprt | Dpep1 | MGP_SPRETEiJ_P0089905 | MGP_SPRETEiJ_P0089950 | Adenine phosphoribosyl transferase. | Dipeptidase 1. | 0.613 |
Aprt | Got2 | MGP_SPRETEiJ_P0089905 | MGP_SPRETEiJ_P0089194 | Adenine phosphoribosyl transferase. | Glutamatic-oxaloacetic transaminase 2, mitochondrial. | 0.613 |
Aprt | Lcat | MGP_SPRETEiJ_P0089905 | MGP_SPRETEiJ_P0089358 | Adenine phosphoribosyl transferase. | Lecithin cholesterol acyltransferase. | 0.613 |
Aprt | MGP_SPRETEiJ_P0023847 | MGP_SPRETEiJ_P0089905 | MGP_SPRETEiJ_P0023847 | Adenine phosphoribosyl transferase. | annotation not available | 0.937 |
Aprt | Zfp41 | MGP_SPRETEiJ_P0089905 | MGP_SPRETEiJ_P0040318 | Adenine phosphoribosyl transferase. | Zinc finger protein 41. | 0.613 |
Crebl2 | Zfp41 | MGP_SPRETEiJ_P0079701 | MGP_SPRETEiJ_P0040318 | cAMP responsive element binding protein-like 2. | Zinc finger protein 41. | 0.465 |
Dpep1 | Aprt | MGP_SPRETEiJ_P0089950 | MGP_SPRETEiJ_P0089905 | Dipeptidase 1. | Adenine phosphoribosyl transferase. | 0.613 |
Dpep1 | Got2 | MGP_SPRETEiJ_P0089950 | MGP_SPRETEiJ_P0089194 | Dipeptidase 1. | Glutamatic-oxaloacetic transaminase 2, mitochondrial. | 0.613 |
Dpep1 | Lcat | MGP_SPRETEiJ_P0089950 | MGP_SPRETEiJ_P0089358 | Dipeptidase 1. | Lecithin cholesterol acyltransferase. | 0.613 |
Dpep1 | Zfp41 | MGP_SPRETEiJ_P0089950 | MGP_SPRETEiJ_P0040318 | Dipeptidase 1. | Zinc finger protein 41. | 0.613 |
Got2 | Aprt | MGP_SPRETEiJ_P0089194 | MGP_SPRETEiJ_P0089905 | Glutamatic-oxaloacetic transaminase 2, mitochondrial. | Adenine phosphoribosyl transferase. | 0.613 |
Got2 | Dpep1 | MGP_SPRETEiJ_P0089194 | MGP_SPRETEiJ_P0089950 | Glutamatic-oxaloacetic transaminase 2, mitochondrial. | Dipeptidase 1. | 0.613 |
Got2 | Lcat | MGP_SPRETEiJ_P0089194 | MGP_SPRETEiJ_P0089358 | Glutamatic-oxaloacetic transaminase 2, mitochondrial. | Lecithin cholesterol acyltransferase. | 0.623 |
Got2 | Zfp41 | MGP_SPRETEiJ_P0089194 | MGP_SPRETEiJ_P0040318 | Glutamatic-oxaloacetic transaminase 2, mitochondrial. | Zinc finger protein 41. | 0.658 |
Lcat | Aprt | MGP_SPRETEiJ_P0089358 | MGP_SPRETEiJ_P0089905 | Lecithin cholesterol acyltransferase. | Adenine phosphoribosyl transferase. | 0.613 |
Lcat | Dpep1 | MGP_SPRETEiJ_P0089358 | MGP_SPRETEiJ_P0089950 | Lecithin cholesterol acyltransferase. | Dipeptidase 1. | 0.613 |
Lcat | Got2 | MGP_SPRETEiJ_P0089358 | MGP_SPRETEiJ_P0089194 | Lecithin cholesterol acyltransferase. | Glutamatic-oxaloacetic transaminase 2, mitochondrial. | 0.623 |
Lcat | Zfp41 | MGP_SPRETEiJ_P0089358 | MGP_SPRETEiJ_P0040318 | Lecithin cholesterol acyltransferase. | Zinc finger protein 41. | 0.613 |
MGP_SPRETEiJ_P0023847 | Aprt | MGP_SPRETEiJ_P0023847 | MGP_SPRETEiJ_P0089905 | annotation not available | Adenine phosphoribosyl transferase. | 0.937 |
MGP_SPRETEiJ_P0023847 | Zfp41 | MGP_SPRETEiJ_P0023847 | MGP_SPRETEiJ_P0040318 | annotation not available | Zinc finger protein 41. | 0.639 |
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